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Paul McCarthy authored
eb02d452 (ihuszar/master, ihuszar/HEAD, master) Bugfix to DummyLogger 91202a5f Adding print_fn to Optimiser a0907eb4 Removed deprecated numba compilation from transformations d85e35e4 Moved srchash from the archived tirlscripts module to TIRL bb790fc7 Replaced setup.py with pip in the installation instructions 1b87a622 Fixed tirlscript registration routine. 3544c446 Fixed tirlscript registration routine. 31c706d7 Moved cli and scripting utils to tirlscripts. c55b5929 Changed TIRLSCRIPTS --> TSREGISTRY 74bb6029 Implemented the new tirlscripts management system cd8e5cbd Merge branch 'master' of /Users/inhuszar/apps/tirl-cliutils Merging CLI utilities into the main TIRL repository. 7d6dd030 Module structure is ready to be merged into TIRL c5099f13 Merge branch 'master' of /Users/inhuszar/apps/tirl-scriptutils Merging scriptutils into main TIRL repository. 1537f71b Module structure update 2. ff336b92 Fixed module structure. 725dd3f6 Scriptutils are ready to be merged into TIRL 4cfac73d v31: MND Stage 4 bugfix log; updated (C) information 80e85081 v31: MND Stage 4 bugfix log; updated (C) information 4b00c663 Updated copyright information. 551fa598 Change from FSL licence to Apache v2 2e34ec58 v3.6: new tirlenv w/py310 + amended (C) dates 61b5c19c v3.5 - Fortran-to-C conversion on import from NIfTI fb15e8a2 Accidental version update to v3.5 after reverting rotation changes. 6f15c661 Monkey project 2 stage 1 registration commit. f67a45d5 Version 3.4.1 update - TImage masking bugfix 47ce7619 Gitignore update 7cf80982 Version 3.4 update - finalising file I/O changes 2d3694d0 v3.4 updates - no more overuse of file handles 6f86fe98 Version 24 update -- cliutils extension b98daf10 Version 24 -- BigMac: configurable sapshot resolution 51f3d7d8 Version 3.2 update - added method: TImage.resample() 4dc90eba v3.2.1 updates - resolved multi-user conflict on TWD 3ff97cff v3.2.1 updates - resolved multi-user conflict on TWD 5f484880 v3.2.1 updates - resolved multi-user conflict on TWD 39538ef2 v3.2 updates - string update 06fe4db8 Version 21 update -- versioning changes, bugfixes in BigMac 341ebeb1 Merge remote-tracking branch 'origin/master' 27e9a20b v3.2 updates - minor code reformatting 30de277c Version 1.2.1 update - project-specific version control, bigmac bugfixes. f121e637 Bugfix in TiffTileLoader, removed all test instructions. dac1b0e4 v3.1.5 updates - added TIRLLoader class 5be15300 v3.1.5 updates - TField and TImage instance name assignment 36496776 v3.1.5 updates - bugfixes a2b1d632 v3.1.5 updates - bugfixes 806479b4 v3.1.5 updates - bugfixes dd88a411 Version 1.1 update. 9800106a v3.1.4 updates - added "affine" option for loading NIfTI files. f29d27c8 v3.1.4 updates - auto-install SimpleITK to the tirl environment 9ce8c050 v3.1.4 updates - MINC support, CostPoints, and bugfix. 3eeacdf4 v3.1.3 updates - added VIPS-generated pyramidal TIFF support to TiffTileLoader 2492a79e v3.1.2 updates - bugfix for large Domain objects that occasionally returned invalid voxel coordinates due to integer-type overflow 4ce3248f v3.1.1 updates b7507511 Initial commit v1.0.0 357ea452 Restructuring the tirl repository for FSL release 6e083b9a Fixed git merge error. f1b717a0 Partial bugfix for TIRLFile object ID redundancy problem. 38a47398 Partial bugfix for TIRLFile object ID redundancy problem. 5e6edf7e Bugfix: eliminate NaNs from interpolated mask (wasteful)
c536f718Paul McCarthy authoredeb02d452 (ihuszar/master, ihuszar/HEAD, master) Bugfix to DummyLogger 91202a5f Adding print_fn to Optimiser a0907eb4 Removed deprecated numba compilation from transformations d85e35e4 Moved srchash from the archived tirlscripts module to TIRL bb790fc7 Replaced setup.py with pip in the installation instructions 1b87a622 Fixed tirlscript registration routine. 3544c446 Fixed tirlscript registration routine. 31c706d7 Moved cli and scripting utils to tirlscripts. c55b5929 Changed TIRLSCRIPTS --> TSREGISTRY 74bb6029 Implemented the new tirlscripts management system cd8e5cbd Merge branch 'master' of /Users/inhuszar/apps/tirl-cliutils Merging CLI utilities into the main TIRL repository. 7d6dd030 Module structure is ready to be merged into TIRL c5099f13 Merge branch 'master' of /Users/inhuszar/apps/tirl-scriptutils Merging scriptutils into main TIRL repository. 1537f71b Module structure update 2. ff336b92 Fixed module structure. 725dd3f6 Scriptutils are ready to be merged into TIRL 4cfac73d v31: MND Stage 4 bugfix log; updated (C) information 80e85081 v31: MND Stage 4 bugfix log; updated (C) information 4b00c663 Updated copyright information. 551fa598 Change from FSL licence to Apache v2 2e34ec58 v3.6: new tirlenv w/py310 + amended (C) dates 61b5c19c v3.5 - Fortran-to-C conversion on import from NIfTI fb15e8a2 Accidental version update to v3.5 after reverting rotation changes. 6f15c661 Monkey project 2 stage 1 registration commit. f67a45d5 Version 3.4.1 update - TImage masking bugfix 47ce7619 Gitignore update 7cf80982 Version 3.4 update - finalising file I/O changes 2d3694d0 v3.4 updates - no more overuse of file handles 6f86fe98 Version 24 update -- cliutils extension b98daf10 Version 24 -- BigMac: configurable sapshot resolution 51f3d7d8 Version 3.2 update - added method: TImage.resample() 4dc90eba v3.2.1 updates - resolved multi-user conflict on TWD 3ff97cff v3.2.1 updates - resolved multi-user conflict on TWD 5f484880 v3.2.1 updates - resolved multi-user conflict on TWD 39538ef2 v3.2 updates - string update 06fe4db8 Version 21 update -- versioning changes, bugfixes in BigMac 341ebeb1 Merge remote-tracking branch 'origin/master' 27e9a20b v3.2 updates - minor code reformatting 30de277c Version 1.2.1 update - project-specific version control, bigmac bugfixes. f121e637 Bugfix in TiffTileLoader, removed all test instructions. dac1b0e4 v3.1.5 updates - added TIRLLoader class 5be15300 v3.1.5 updates - TField and TImage instance name assignment 36496776 v3.1.5 updates - bugfixes a2b1d632 v3.1.5 updates - bugfixes 806479b4 v3.1.5 updates - bugfixes dd88a411 Version 1.1 update. 9800106a v3.1.4 updates - added "affine" option for loading NIfTI files. f29d27c8 v3.1.4 updates - auto-install SimpleITK to the tirl environment 9ce8c050 v3.1.4 updates - MINC support, CostPoints, and bugfix. 3eeacdf4 v3.1.3 updates - added VIPS-generated pyramidal TIFF support to TiffTileLoader 2492a79e v3.1.2 updates - bugfix for large Domain objects that occasionally returned invalid voxel coordinates due to integer-type overflow 4ce3248f v3.1.1 updates b7507511 Initial commit v1.0.0 357ea452 Restructuring the tirl repository for FSL release 6e083b9a Fixed git merge error. f1b717a0 Partial bugfix for TIRLFile object ID redundancy problem. 38a47398 Partial bugfix for TIRLFile object ID redundancy problem. 5e6edf7e Bugfix: eliminate NaNs from interpolated mask (wasteful)
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