Commit 8a91c6c3 authored by Saad Jbabdi's avatar Saad Jbabdi
Browse files

added table of tracts

parent 226fa073
......@@ -74,6 +74,35 @@ NeuroImage, 76(1), 400-411. DOI: 10.1016/j.neuroimage.2013.03.015
We also provide a copy of the F99 atlas in $FSLDIR/etc/xtract_data/standard/F99
This includes a helper script for registering your own diffusion/structural data to the F99 altas
When running XTRACT with the '-species' option, a predefined list of tracts is automatically extracted. Currently the following tracts are available:
| **Tract** | **Abbreviation** |
| --------| ------------ |
| Arcuate Fasciculus | AF |
| Acoustic Radiation | AR |
| Anterior Thalamic Radiation | ATR |
| Cingulum subsection : Dorsal | CBD |
| Cingulum subsection : Parahippocampal | CBP |
| Cingulum subsection : Temporal | CBT |
| Corticospinal Tract | CST |
| Frontal Aslant | FA |
| Forceps Major | FMA |
| Forceps Minor | FMI |
| Fornix | FX |
| Inferior Longitudinal Fasciculus | ILF |
| Inferior Fronto-Occipital Fasciculus | IFO |
| Middle Cerebellar Peduncle | MCP |
| Middle Longitudinal Fasciculuc | MdLF |
| Optic Radiation | OR |
| Superior Thalamic Radiation | STR |
| Superior Longitudinal Fasciculus 1 | SLF1 |
| Superior Longitudinal Fasciculus 2 | SLF2 |
| Superior Longitudinal Fasciculus 3 | SLF3 |
| Anterior Commissure | AC |
| Uncinate Fasciculus | UF |
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## Adding your own tracts:
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