Commits · master · Hossein Rafipoor / bench

27 Nov, 2021 2 commits
- added default names for summary measures (required in inference and further plottings) · 2f734fc0
  Hossein authored Nov 27, 2021
  
  2f734fc0
- added default names for summary measures (required in inference and further plottings) · a89cbfb5
  Hossein authored Nov 27, 2021
  
  a89cbfb5
25 Nov, 2021 6 commits
- updated prior estimation in model inversion to exclude signal fractions · 33581d5e
  Hossein authored Nov 25, 2021
  
  33581d5e
- added amount for infer_change to the model inversion module · c2814207
  Hossein authored Nov 25, 2021
  
  c2814207
- added infer_change to the model inversion module · de945f0c
  Hossein authored Nov 25, 2021
  
  de945f0c
- added noise level to the arguments of the decorator · 1af6be6c
  Hossein authored Nov 25, 2021
  
  1af6be6c
- updated docstring for infer · 59d98eb3
  Hossein authored Nov 25, 2021
  
  59d98eb3
- added new decroator to directly map microstructural parameters to the summary measurements. · 7483a286
  Hossein authored Nov 25, 2021
  
  7483a286
08 Oct, 2021 1 commit
- refactored · 5e7b5b56
  Hossein authored Oct 08, 2021
  
  5e7b5b56
27 Sep, 2021 4 commits
- fixed a problem with argparse · e49b25c0
  Hossein authored Sep 27, 2021
  
  e49b25c0
- fixed a problem with argparse · c594ea2e
  Hossein authored Sep 27, 2021
  
  c594ea2e
- added summary names to the glm dir. · 0e5b1b4c
  Hossein authored Sep 27, 2021
  
  0e5b1b4c
- added summary names to the glm dir. · c31f7e9a
  Hossein authored Sep 27, 2021
  
  c31f7e9a
26 Sep, 2021 1 commit

Hossein authored Sep 26, 2021

changed lmax to shm_degree
added check for having enough directions in each shell

d2414085

16 Sep, 2021 1 commit

ignore all overflow warnings while computing the probablities. · 8847be7a

Hossein authored Sep 16, 2021

check if sigma_n is singular.

remove generated deformation field after using it.
added a parallel flag for inference.

8847be7a

15 Sep, 2021 5 commits
- changed default parallel flag · 03341922
  Hossein authored Sep 15, 2021
  
  03341922
- changed exception error catch to everything(rather than just singular matrix) · 3d20cf6d
  Hossein authored Sep 15, 2021
  
  3d20cf6d
- changed exception error catch to everything(rather than just singular matrix) · 90245235
  Hossein authored Sep 15, 2021
  
  90245235
- remove the option for non numba in l2sigma · 03cdd637
  Hossein authored Sep 15, 2021
  
  03cdd637
- remove the option for non numba in l2sigma · 14456365
  Hossein authored Sep 15, 2021
  
  14456365
14 Sep, 2021 9 commits
- added list of available models to help msg · 6ae4082d
  Hossein authored Sep 14, 2021
  
  6ae4082d
- added force local flag · 90322bf9
  Hossein authored Sep 14, 2021
  
  90322bf9
- added verbose, removed extra prints · 7e3dd5a1
  Hossein authored Sep 14, 2021
  
  7e3dd5a1
- fixed the bug for single bval in summary measures. · 4e200292
  Hossein authored Sep 14, 2021
  
  4e200292
- replaced nibable with fslpy write · 318d1f38
  Hossein authored Sep 14, 2021
  
  318d1f38
- Merge branch 'saad_branch' into 'master' · ab888860
  Hossein Rafipoor authored Sep 14, 2021
```
Small saad change e.g. typos and the like

See merge request !4
```
  ab888860
- Merge branch 'master' into 'saad_branch' · 40f9de1f
  Hossein Rafipoor authored Sep 14, 2021
```
# Conflicts:
#   README.md
```
  40f9de1f
- added default values to help message · a4a1040b
  Hossein authored Sep 14, 2021
  
  a4a1040b
- Merge remote-tracking branch 'origin/master' · 0a5e7f2f
  Hossein authored Sep 14, 2021
  
  0a5e7f2f
13 Sep, 2021 6 commits
- print statement for glm · dcf88279
  Hossein authored Sep 13, 2021
  
  dcf88279
- fixed wrong flag for normalize · 88b45f8a
  Hossein authored Sep 13, 2021
  
  88b45f8a
- Update README.md · 538e0cd8
  Hossein Rafipoor authored Sep 13, 2021
  
  538e0cd8
- Update README.md · 8150a354
  Hossein Rafipoor authored Sep 13, 2021
  
  8150a354
- Small saad change e.g. typos and the like · ffbeaa8d
  Saad Jbabdi authored Sep 13, 2021
  
  ffbeaa8d
- Update README.md · 342ee80a
  Hossein Rafipoor authored Sep 13, 2021
  
  342ee80a
08 Sep, 2021 2 commits
- fixed setup.py · 721889f1
  Hossein authored Sep 08, 2021
  
  721889f1
- removed progressbar as its not maintained anymore · 15c8e2c7
  Hossein authored Sep 08, 2021
  
  15c8e2c7
07 Sep, 2021 1 commit
- Merge remote-tracking branch 'origin/master' · d81846b8
  Hossein authored Sep 07, 2021
  
  d81846b8
25 Aug, 2021 1 commit
- divide paired covariance by the number of subjects · 28142b6a
  Hossein authored Aug 25, 2021
  
  28142b6a
24 Aug, 2021 1 commit
- fixed a bug in Glm writing. · 8248f139
  Hossein authored Aug 24, 2021
  
  8248f139