CHANGELOG.rst

This document contains the FSL-MRS release history in reverse chronological order.

1.0.5 (Friday 9th October 2020)
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- Extended documentation of hardcoded constants, including MCMC priors.
- Extended documentation of synthetic macromolecules.
- Added flag to MCMC optimise baseline parameters.

1.0.4 (Friday 14th August 2020)
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- Fixed bug in automatic conjugation facility of fsl_mrs_preproc
- jmrui text file reader now handles files with both FID and spectra

1.0.3 (Friday 10th July 2020)
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- Changed to pure python version of HLSVDPRO (hlsvdpropy). Slight speed penalty
  but hopefully reduced cross-compilation issues.
- fsl_mrs_preproc now outputs zipped NIFTI files to match the rest of the command-line   scripts.
- Apodisation option added to alignment in fsl_mrs_proc and fsl_mrs_preproc. Reduces effect of noise. Default value is 10 Hz of exponential apodisation.
- Fixed phasing subcommand added to fsl_mrs_proc allowing the user to apply a fixed 0th and 1st order phase.
- mrs_vis now handles folders as an input for MRS data (still handles folders of basis files).
- Conjugation command added to fsl_mrs_proc.
- fsl_mrs_preproc automatically conjugates input spectra if required.
- Typos and small bug fixes.
- Documentation expanded.

1.0.2 (Saturday 27th June 2020)
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- Add missing requirement (pillow)

1.0.1 (Friday 19th June 2020)
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- Output folder in fsl_mrs_proc will now be created if it does not exist.
- fsl_mrs_proc now handles data with a singleton coil dimension correctly.
- --ind_scale and --disable_MH_priors options added to fsl_mrs and fsl_mrsi.

1.0.0 (Wednesday 17th June 2020)
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- First public release of package.