meta.yaml 1.76 KB
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{% set version = "2.2.1" %}
package:
    name: tirl
    version: {{ version }}

source:
    path: ../

requirements:
    build:
        - {{ compiler('cxx') }}

    host:

        - python
        - cython
        - numpy
        - openblas

    run:
        - attrdict
        - dask
        - dill
        - imagecodecs
        - imageio
        - joblib
        - mayavi
        - matplotlib
        - nibabel
        - nlopt
        - numba
        - numpy
        - opencv
        - openslide
        - pillow
        - psutil
        - pygments
        - python
        - python-dateutil
        - scikit-image
        - scikit-learn
        - scipy
        - tifffile

test:
    imports:
        - tirl
        - tirl.fsl
        - tirl.chain
        - tirl.tfield
        - tirl.timage
        - tirl.domain
        - tirl.point
        - tirl.cmodules
        - tirl.operations
        - tirl.interpolators
        - tirl.parameters
        - tirl.transformations.basic
        - tirl.transformations.linear
        - tirl.transformations.nonlinear
        - tirl.costs
        - tirl.optimisation
        - tirl.regularisers
        - tirl.scripts
        - tirl.tirlvision
        - tirl.usermodules

    commands:
        - tirl home
        - tirl version
        - tirl info
        - tirl module
        - tirl histology_to_block
        - tirl find_sites
        - tirl block_to_slice
        - tirl slice_to_volume
        - tirl prepare_multi_stage3
        - tirl combine
        - tirl stripbg
        - tirl extract_blocks
        - tirl crop_centre
        - tirl sliceview

about:
    home: https://git.fmrib.ox.ac.uk/ihuszar/tirl/
    license: FSL
    license_file: LICENSE.txt
    summary: Tensor Image Registration Library
    dev_url: https://git.fmrib.ox.ac.uk/ihuszar/tirl/