From 105f316d9b3f428d7a90315dbd558e2a56e4c578 Mon Sep 17 00:00:00 2001
From: Paul McCarthy <pauldmccarthy@gmail.com>
Date: Thu, 2 Nov 2017 17:06:09 +0000
Subject: [PATCH] Primary extension for image pairs is now hdr, rather than
img. Other little doc tweaks.
---
fsl/data/image.py | 4 ++--
fsl/utils/imcp.py | 2 +-
fsl/utils/path.py | 2 +-
3 files changed, 4 insertions(+), 4 deletions(-)
diff --git a/fsl/data/image.py b/fsl/data/image.py
index 3b3e87041..152cfa133 100644
--- a/fsl/data/image.py
+++ b/fsl/data/image.py
@@ -1284,8 +1284,8 @@ EXTENSION_DESCRIPTIONS = ['Compressed NIFTI images',
"""Descriptions for each of the extensions in :data:`ALLOWED_EXTENSIONS`. """
-FILE_GROUPS = [('.img', '.hdr'),
- ('.img.gz', '.hdr.gz')]
+FILE_GROUPS = [('.hdr', '.img'),
+ ('.hdr.gz', '.img.gz')]
"""File suffix groups used by :func:`addExt` to resolve file path
ambiguities - see :func:`fsl.utils.path.addExt`.
"""
diff --git a/fsl/utils/imcp.py b/fsl/utils/imcp.py
index 398a18774..d2049cb34 100644
--- a/fsl/utils/imcp.py
+++ b/fsl/utils/imcp.py
@@ -4,7 +4,7 @@
#
# Author: Paul McCarthy <pauldmccarthy@gmail.com>
#
-"""
+"""This module contains functions for moving/copying NIFIT image files.
.. autosummary::
:nosignatures:
diff --git a/fsl/utils/path.py b/fsl/utils/path.py
index 01df91f8c..bccce3d27 100644
--- a/fsl/utils/path.py
+++ b/fsl/utils/path.py
@@ -253,7 +253,7 @@ def getFileGroup(path,
[('.img', '.hdr'),
('.img.gz', '.hdr.gz')]
- If you specify``fileGroups=[('.img', '.hdr')]`` and ``prefix='file'``, and
+ If you specify ``fileGroups=[('.img', '.hdr')]`` and ``prefix='file'``, and
both ``file.img`` and ``file.hdr`` exist, the :func:`addExt` function would
return ``file.img`` (i.e. the file which matches the first extension in
the group).
--
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