From 19571ee6977d524defd114d9b971412cefa4db3c Mon Sep 17 00:00:00 2001
From: Paul McCarthy <pauldmccarthy@gmail.com>
Date: Wed, 6 Mar 2019 14:18:10 +1030
Subject: [PATCH] CI: Atlas data location can be customised with env var

---
 .ci/test_template.sh | 2 +-
 .gitlab-ci.yml       | 3 +++
 2 files changed, 4 insertions(+), 1 deletion(-)

diff --git a/.ci/test_template.sh b/.ci/test_template.sh
index dd3e00226..00bc034b1 100644
--- a/.ci/test_template.sh
+++ b/.ci/test_template.sh
@@ -28,7 +28,7 @@ if [ "$TEST_STYLE"x != "x" ]; then exit 0; fi
 # tests, and need $FSLDIR to be defined
 export FSLDIR=/fsl/
 mkdir -p $FSLDIR/data/
-rsync -rv "fsldownload:data/atlases/" "$FSLDIR/data/atlases/"
+rsync -rv "fsldownload:$FSL_ATLAS_DIR" "$FSLDIR/data/atlases/"
 
 # Finally, run the damned tests.
 TEST_OPTS="--cov-report= --cov-append"
diff --git a/.gitlab-ci.yml b/.gitlab-ci.yml
index 792aee38e..c07fcec57 100644
--- a/.gitlab-ci.yml
+++ b/.gitlab-ci.yml
@@ -72,6 +72,9 @@ stages:
 #   - FSL_HOST:                      - Username@host to download FSL data from
 #                                      (e.g. "paulmc@jalapeno.fmrib.ox.ac.uk")
 #
+#   - FSL_ATLAS_DIR:                 - Location of the FSL atlas data on
+#                                      FSL_HOST.
+#
 #   - TWINE_USERNAME:                - Username to use when uploading to pypi
 #
 #   - TWINE_PASSWORD:                - Password to use when uploading to pypi
-- 
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