From 4a5f3dcc55eefc1d49ec4e974c50d34c48d3f687 Mon Sep 17 00:00:00 2001
From: Paul McCarthy <pauld.mccarthy@gmail.com>
Date: Mon, 9 Jan 2017 13:36:24 +0000
Subject: [PATCH] Image class will not ignore the xform if a header is also
provided
---
fsl/data/image.py | 5 +++--
1 file changed, 3 insertions(+), 2 deletions(-)
diff --git a/fsl/data/image.py b/fsl/data/image.py
index 8a6aa7ae2..eae93b74e 100644
--- a/fsl/data/image.py
+++ b/fsl/data/image.py
@@ -551,8 +551,9 @@ class Image(Nifti, notifier.Notifier):
# to 1mm^3 in real world space)
elif isinstance(image, np.ndarray):
- if header is not None: xform = header.get_best_affine()
- elif xform is None: xform = np.identity(4)
+ if xform is None:
+ if header is not None: xform = header.get_best_affine()
+ else: xform = np.identity(4)
# We default to NIFTI1 and not
# NIFTI2, because the rest of
--
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