From 4ac53e63aea74f42b9fa0ed96a37a6b3ecce5b87 Mon Sep 17 00:00:00 2001
From: Paul McCarthy <pauld.mccarthy@gmail.com>
Date: Fri, 17 Mar 2017 14:06:09 +0000
Subject: [PATCH] rescanAtlases does not crash on invalid XML files.
---
fsl/data/atlases.py | 7 ++++++-
1 file changed, 6 insertions(+), 1 deletion(-)
diff --git a/fsl/data/atlases.py b/fsl/data/atlases.py
index 36b0d48f9..6fd9d4bea 100644
--- a/fsl/data/atlases.py
+++ b/fsl/data/atlases.py
@@ -130,7 +130,12 @@ class AtlasRegistry(notifier.Notifier):
if atlasID is not None and self.hasAtlas(atlasID):
continue
- self.addAtlas(atlasPath, atlasID, save=False)
+ try:
+ self.addAtlas(atlasPath, atlasID, save=False)
+ except:
+ log.warning('Failed to load atlas '
+ 'specification {}'.format(atlasPath),
+ exc_info=True)
def listAtlases(self):
--
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