From 97363253e8284b2781b1293bab863829ae23005c Mon Sep 17 00:00:00 2001
From: Paul McCarthy <pauldmccarthy@gmail.com>
Date: Fri, 27 Mar 2020 12:08:45 +0000
Subject: [PATCH] TEST: update fslsub test (a change in my dev environment?)
---
tests/test_fslsub.py | 13 +++++++++----
1 file changed, 9 insertions(+), 4 deletions(-)
diff --git a/tests/test_fslsub.py b/tests/test_fslsub.py
index 2065dcd10..93e96a236 100644
--- a/tests/test_fslsub.py
+++ b/tests/test_fslsub.py
@@ -14,6 +14,7 @@ import textwrap as tw
import contextlib
import argparse
+import fsl
from fsl.utils import fslsub
from fsl.utils.tempdir import tempdir
@@ -28,6 +29,13 @@ import os
import os.path as op
import sys
import subprocess as sp
+
+fslpydir = op.join('{}', '..')
+env = dict(os.environ)
+
+env['PYTHONPATH'] = fslpydir
+sys.path.insert(0, fslpydir)
+
import fsl
args = sys.argv[1:]
@@ -45,9 +53,6 @@ for i in range(len(args)):
args = args[i:]
-env = dict(os.environ)
-env['PYTHONPATH'] = op.join(op.dirname(fsl.__file__), '..')
-
cmd = op.basename(args[0])
jobid = random.randint(1, 9999)
@@ -57,7 +62,7 @@ with open('{{}}.o{{}}'.format(cmd, jobid), 'w') as stdout, \
print(str(jobid))
sys.exit(0)
-""".format(sys.executable).strip()
+""".format(sys.executable, op.dirname(fsl.__file__)).strip()
@contextlib.contextmanager
--
GitLab