From a95870fe5cd8ed9e27238f81bb83235a173fa7e5 Mon Sep 17 00:00:00 2001
From: Paul McCarthy <pauldmccarthy@gmail.com>
Date: Thu, 12 Dec 2019 10:23:35 +0000
Subject: [PATCH] RF: Don't use nibabel get_data method
---
fsl/data/mghimage.py | 3 ++-
1 file changed, 2 insertions(+), 1 deletion(-)
diff --git a/fsl/data/mghimage.py b/fsl/data/mghimage.py
index a143e06ce..be29b5cad 100644
--- a/fsl/data/mghimage.py
+++ b/fsl/data/mghimage.py
@@ -12,6 +12,7 @@ Freesurfer ``mgh``/``mgz`` image files.
import os.path as op
import six
+import numpy as np
import nibabel as nib
import fsl.utils.path as fslpath
@@ -54,7 +55,7 @@ class MGHImage(fslimage.Image):
name = 'MGH image'
filename = None
- data = image.get_data()
+ data = np.asanyarray(image.dataobj)
xform = image.affine
vox2surf = image.header.get_vox2ras_tkr()
--
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