From b362fae5e822586f422b8558360a0dd7aa261a5b Mon Sep 17 00:00:00 2001
From: Paul McCarthy <pauldmccarthy@gmail.com>
Date: Mon, 16 Mar 2020 15:24:28 +0000
Subject: [PATCH] DOC: listen to sphinx warnings
---
CHANGELOG.rst | 4 ++--
fsl/utils/image/__init__.py | 5 ++---
fsl/wrappers/wrapperutils.py | 5 +++--
3 files changed, 7 insertions(+), 7 deletions(-)
diff --git a/CHANGELOG.rst b/CHANGELOG.rst
index 3279c6db3..62a3805b9 100644
--- a/CHANGELOG.rst
+++ b/CHANGELOG.rst
@@ -223,8 +223,8 @@ Changed
* The :class:`.Cache` class has a new ``lru`` option, allowing it to be used
as a least-recently-used cache.
-* The :mod:`.filetree` module has been refactored to make it easier for the
- :mod:`.query` module to work with file tree hierarchies.
+* The :mod:`fsl.utils.filetree` module has been refactored to make it easier
+ for the :mod:`.query` module to work with file tree hierarchies.
* The :meth:`.LabelAtlas.get` method has a new ``binary`` flag, allowing
either a binary mask, or a mask with the original label value, to be
returned.
diff --git a/fsl/utils/image/__init__.py b/fsl/utils/image/__init__.py
index 54dde4b2a..a0d9ace49 100644
--- a/fsl/utils/image/__init__.py
+++ b/fsl/utils/image/__init__.py
@@ -10,8 +10,7 @@ manipulating and working with :class:`.Image` objects.
The following modules are available:
.. autosummary::
- :nosignature
- .image.resample
- .image.roi
+ fsl.utils.image.resample
+ fsl.utils.image.roi
"""
diff --git a/fsl/wrappers/wrapperutils.py b/fsl/wrappers/wrapperutils.py
index 41ed391e2..ac9a55c6b 100644
--- a/fsl/wrappers/wrapperutils.py
+++ b/fsl/wrappers/wrapperutils.py
@@ -463,8 +463,9 @@ class _FileOrThing(object):
This is because most functions that are decorated with the
:func:`fileOrImage` or :func:`fileOrArray` decorators will invoke a call
- to :func:`.run` or :func:`.runfsl`, where a value of ``submit=True`` will
- cause the command to be executed asynchronously on a cluster platform.
+ to :func:`.run.run` or :func:`.runfsl`, where a value of ``submit=True``
+ will cause the command to be executed asynchronously on a cluster
+ platform.
A :exc:`ValueError` will be raised if the decorated function is called
--
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