diff --git a/fsl/utils/filetree/trees/feat.tree b/fsl/utils/filetree/trees/feat.tree new file mode 100644 index 0000000000000000000000000000000000000000..cb660c4d61605666e74e9502ebc8c7d8b8caea33 --- /dev/null +++ b/fsl/utils/filetree/trees/feat.tree @@ -0,0 +1,13 @@ +filtered_func_data.nii.gz (filtered_func_data) +mask.nii.gz (mask) +example_func.nii.gz (example_func) +mean_func.nii.gz (mean_func) +cluster_mask_zfstat{ftest}.nii.gz (cluster_mask_zfstat) +cluster_mask_zstat{contrast}.nii.gz (cluster_mask_zstat) +thresh_zfstat{ftest}.nii.gz (thresh_zfstat) +thresh_zstat{contrast}.nii.gz (thresh_zstat) +rendered_thresh_zstat{contrast}.nii.gz (rendered_thresh_zstat) +reg + ->feat_reg (reg) +stats + ->feat_stats (stats) \ No newline at end of file diff --git a/fsl/utils/filetree/trees/feat_reg.tree b/fsl/utils/filetree/trees/feat_reg.tree new file mode 100644 index 0000000000000000000000000000000000000000..9599af64a5d420c24438625ff3b5453bf6a3fe1d --- /dev/null +++ b/fsl/utils/filetree/trees/feat_reg.tree @@ -0,0 +1,4 @@ +highres.nii.gz (highres) +standard.nii.gz (standard) +example_func2highres.nii.gz (example_func2highres) +example_func2standard.nii.gz (example_func2standard) \ No newline at end of file diff --git a/fsl/utils/filetree/trees/feat_stats.tree b/fsl/utils/filetree/trees/feat_stats.tree new file mode 100644 index 0000000000000000000000000000000000000000..a6d795814c691075d531d95565018115d795c990 --- /dev/null +++ b/fsl/utils/filetree/trees/feat_stats.tree @@ -0,0 +1,8 @@ +tstat{contrast}.nii.gz (tstat) +zstat{contrast}.nii.gz (zstat) +cope{contrast}.nii.gz (cope) +varcope{contrast}.nii.gz (varcope) +fstat{ftest}.nii.gz (fstat) +zfstat{ftest}.nii.gz (zfstat) +pe{pe}.nii.gz (pe) +res4d.nii.gz (res4d) \ No newline at end of file diff --git a/fsl/utils/filetree/trees/gfeat.tree b/fsl/utils/filetree/trees/gfeat.tree new file mode 100644 index 0000000000000000000000000000000000000000..a0f2ffc1f5d85a42b0f858ed6a3f60de707e7240 --- /dev/null +++ b/fsl/utils/filetree/trees/gfeat.tree @@ -0,0 +1,2 @@ +cope{lower_level_contrast}.feat + ->feat (cope.feat) \ No newline at end of file diff --git a/fsl/utils/filetree/trees/vbm.tree b/fsl/utils/filetree/trees/vbm.tree new file mode 100644 index 0000000000000000000000000000000000000000..32b7b0eddec5ba5ccb7e1b9aaab38a59fba878f6 --- /dev/null +++ b/fsl/utils/filetree/trees/vbm.tree @@ -0,0 +1,14 @@ +origdata + {subject}.nii.gz (rawdata) +struc + {subject}_struc_GM.nii.gz (struc_GM) + {subject}_struc_GM_to_template_GM.nii.gz (struc_GM_to_template_GM) + {subject}_struc_GM_to_template_GM_mod.nii.gz (struc_GM_to_template_GM_mod) + template_4D_GM.nii.gz + template_GM.nii.gz +stats + GM_mask.nii.gz + GM_merg.nii.gz + GM_mod_merg.nii.gz + GM_mod_merg_s{smoothing}.nii.gz (GM_mod_merg_s) + GM_mod_merg_s{smoothing}_tstat{contrast}.nii.gz (GM_mod_merg_tstat)