From c04931e479f1b9616a5c30cc5ada108eb46cdbd3 Mon Sep 17 00:00:00 2001
From: Paul McCarthy <pauldmccarthy@gmail.com>
Date: Wed, 8 May 2019 11:58:44 +0100
Subject: [PATCH] RF: Use new resample module
---
fsl/data/atlases.py | 6 +++---
1 file changed, 3 insertions(+), 3 deletions(-)
diff --git a/fsl/data/atlases.py b/fsl/data/atlases.py
index 259b91fdf..6ec39a897 100644
--- a/fsl/data/atlases.py
+++ b/fsl/data/atlases.py
@@ -53,6 +53,7 @@ import numpy as np
import fsl.data.image as fslimage
import fsl.data.constants as constants
from fsl.utils.platform import platform as platform
+import fsl.utils.image.resample as resample
import fsl.utils.transform as transform
import fsl.utils.notifier as notifier
import fsl.utils.settings as fslsettings
@@ -695,9 +696,8 @@ class Atlas(fslimage.Image):
# for resampling, as it is most likely
# that the mask is binary.
try:
- mask, xform = mask.resample(self.shape[:3],
- dtype=np.float32,
- order=0)
+ mask, xform = resample.resample(
+ mask, self.shape[:3], dtype=np.float32, order=0)
except ValueError:
raise MaskError('Mask has wrong number of dimensions')
--
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