From c88ce28bd742ee53013dbac66c9363531d65bae4 Mon Sep 17 00:00:00 2001
From: Paul McCarthy <pauldmccarthy@gmail.com>
Date: Fri, 11 Jan 2019 17:15:41 +0000
Subject: [PATCH] RF: Minor tweak to key used for built-in vertex sets
---
fsl/data/gifti.py | 11 ++++++++---
1 file changed, 8 insertions(+), 3 deletions(-)
diff --git a/fsl/data/gifti.py b/fsl/data/gifti.py
index c4d8ce9c7..11cb3d93c 100644
--- a/fsl/data/gifti.py
+++ b/fsl/data/gifti.py
@@ -41,7 +41,7 @@ is expected to have.
"""
-EXTENSION_DESCRIPTIONS = ['GIFTII surface file', 'GIFTI file']
+EXTENSION_DESCRIPTIONS = ['GIFTI surface file', 'GIFTI file']
"""A description for each of the :data:`ALLOWED_EXTENSIONS`. """
@@ -59,7 +59,12 @@ class GiftiMesh(fslmesh.Mesh):
"""Load the given GIFTI file using ``nibabel``, and extracts surface
data using the :func:`loadGiftiMesh` function.
- :arg infile: A GIFTI file (``*..gii``) which contains a surface
+ If the file contains more than one set of vertices, the additional
+ ones are added with keys of the form ``infile_i``, where ``infile`` is
+ the absolute path to the file, and ``i`` is an index number, starting
+ from 1. See the :meth:`.addVertices` method.
+
+ :arg infile: A GIFTI file (``*.gii``) which contains a surface
definition.
:arg fixWinding: Passed through to the :meth:`addVertices` method
@@ -85,7 +90,7 @@ class GiftiMesh(fslmesh.Mesh):
for i, v in enumerate(vertices):
if i == 0: key = infile
- else: key = '{} [{}]'.format(infile, i)
+ else: key = '{}_{}'.format(infile, i)
self.addVertices(v, key, select=(i == 0), fixWinding=fixWinding)
self.setMeta(infile, surfimg)
--
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