From d13df71416700e623e4914e767dfe12f56d30a0c Mon Sep 17 00:00:00 2001
From: Paul McCarthy <pauldmccarthy@gmail.com>
Date: Sun, 27 Aug 2017 15:20:06 -0700
Subject: [PATCH] More nibabel depreaction fixes
---
fsl/data/atlases.py | 2 +-
fsl/data/image.py | 2 +-
2 files changed, 2 insertions(+), 2 deletions(-)
diff --git a/fsl/data/atlases.py b/fsl/data/atlases.py
index 2a10b1214..6f45caffe 100644
--- a/fsl/data/atlases.py
+++ b/fsl/data/atlases.py
@@ -599,7 +599,7 @@ class Atlas(fslimage.Image):
# Even though all the FSL atlases
# are in MNI152 space, not all of
# their sform_codes are correctly set
- self.nibImage.get_header().set_sform(
+ self.nibImage.header.set_sform(
None, code=constants.NIFTI_XFORM_MNI_152)
self.desc = atlasDesc
diff --git a/fsl/data/image.py b/fsl/data/image.py
index 383f02b63..8a2465d29 100644
--- a/fsl/data/image.py
+++ b/fsl/data/image.py
@@ -1065,7 +1065,7 @@ class Image(Nifti):
nib.save(self.__nibImage, filename)
self.__fileobj.close()
self.__nibImage, self.__fileobj = loadIndexedImageFile(filename)
- self.header = self.__nibImage.get_header()
+ self.header = self.__nibImage.header
# We have to create a new ImageWrapper
# instance too, as we have just destroyed
--
GitLab