From e7341f6503e353201217ba845aa842da8a1877ea Mon Sep 17 00:00:00 2001
From: Paul McCarthy <pauldmccarthy@gmail.com>
Date: Sun, 29 Mar 2020 12:02:55 +0100
Subject: [PATCH] BF: Image creation does not fail if a sidecar file with
invalid JSON is present
---
fsl/data/image.py | 10 +++++++++-
1 file changed, 9 insertions(+), 1 deletion(-)
diff --git a/fsl/data/image.py b/fsl/data/image.py
index 8cc5c6208..1dc0aaf93 100644
--- a/fsl/data/image.py
+++ b/fsl/data/image.py
@@ -1162,11 +1162,19 @@ class Image(Nifti):
self.register(self.name, self.__headerChanged, topic='transform')
self.register(self.name, self.__headerChanged, topic='header')
+ # calculate min/max
+ # of image data
if calcRange:
self.calcRange()
+ # try and load metadata
+ # from JSON sidecar files
if self.dataSource is not None and loadMeta:
- self.updateMeta(loadMetadata(self))
+ try:
+ self.updateMeta(loadMetadata(self))
+ except Exception as e:
+ log.warning('Failed to load metadata for %s: %s',
+ self.dataSource, e)
self.__imageWrapper.register(self.__lName, self.__dataRangeChanged)
--
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