Commit e92f2cb0 authored by Paul McCarthy's avatar Paul McCarthy 🚵
Browse files

STY: whitespace

parent d0be230e
......@@ -59,7 +59,7 @@ def test_isFEATDir():
# it's not a feat directory
assert not featanalysis.isFEATDir('nonexistent.feat')
# If any of the above files are not
# If any of the above files are not
# present, it is not a FEAT directory
perms = it.chain(it.combinations(paths, 1),
it.combinations(paths, 2),
......@@ -69,7 +69,7 @@ def test_isFEATDir():
assert not featanalysis.isFEATDir(
op.join(testdir, 'analysis.feat'))
def test_hasStats():
with tests.testdir(['analysis.feat/stats/zstat1.nii.gz']) as testdir:
......@@ -78,7 +78,7 @@ def test_hasStats():
with tests.testdir(['analysis.feat/stats/zstat1.txt']) as testdir:
featdir = op.join(testdir, 'analysis.feat')
assert not featanalysis.hasStats(featdir)
assert not featanalysis.hasStats(featdir)
def test_hasMelodicDir():
......@@ -94,7 +94,7 @@ def test_getAnalysisDir():
'analysis.feat/design.fsf',
'analysis.feat/design.mat',
'analysis.feat/design.con']
testpaths = ['analysis.feat/filtered_func_data.nii.gz',
'analysis.feat/stats/zstat1.nii.gz',
'analysis.feat/logs/feat4_post',
......@@ -106,7 +106,7 @@ def test_getAnalysisDir():
t = op.join(testdir, t)
assert featanalysis.getAnalysisDir(t) == expected
def test_getTopLevelAnalysisDir():
testcases = [
('analysis.feat/filtered_func_data.ica/melodic_IC.nii.gz', 'analysis.feat'),
......@@ -127,7 +127,7 @@ def test_getReportFile():
for paths, expected in testcases:
with tests.testdir(paths) as testdir:
featdir = op.join(testdir, 'analysis.feat')
if expected:
......@@ -145,7 +145,7 @@ def test_loadContrasts():
/ContrastName1 c1
/ContrastName2 c2
/ContrastName3 c3
/NumContrasts 3
/NumContrasts 3
/Matrix
1 0 0
0 1 0
......@@ -188,9 +188,9 @@ def test_loadContrasts():
0 1 1
""",
]
with pytest.raises(Exception):
featanalysis.loadContrasts('no file')
featanalysis.loadContrasts('no file')
with tests.testdir() as testdir:
featdir = op.join(testdir, 'analysis.feat')
......@@ -275,7 +275,7 @@ def test_isFirstLevelAnalysis():
'2ndlevel_1.gfeat', '2ndlevel_2.gfeat']
for featdir in featdirs:
expected = featdir.startswith('1')
featdir = op.join(datadir, featdir)
settings = featanalysis.loadSettings(featdir)
......@@ -393,9 +393,9 @@ def test_getResidualFile():
assert featanalysis.getResidualFile(featdir) == expect
else:
with pytest.raises(fslpath.PathError):
featanalysis.getResidualFile(featdir)
featanalysis.getResidualFile(featdir)
def test_getPEFile():
testcases = [
(['analysis.feat/stats/pe1.nii.gz',
......@@ -417,7 +417,7 @@ def test_getPEFile():
assert featanalysis.getPEFile(featdir, pei) == expect
else:
with pytest.raises(fslpath.PathError):
featanalysis.getPEFile(featdir, pei)
featanalysis.getPEFile(featdir, pei)
def test_getCOPEFile():
......@@ -441,8 +441,8 @@ def test_getCOPEFile():
assert featanalysis.getCOPEFile(featdir, ci) == expect
else:
with pytest.raises(fslpath.PathError):
featanalysis.getCOPEFile(featdir, ci)
featanalysis.getCOPEFile(featdir, ci)
def test_getZStatFile():
testcases = [
......@@ -465,8 +465,8 @@ def test_getZStatFile():
assert featanalysis.getZStatFile(featdir, zi) == expect
else:
with pytest.raises(fslpath.PathError):
featanalysis.getZStatFile(featdir, zi)
featanalysis.getZStatFile(featdir, zi)
def test_getClusterMaskFile():
testcases = [
......@@ -489,4 +489,4 @@ def test_getClusterMaskFile():
assert featanalysis.getClusterMaskFile(featdir, ci) == expect
else:
with pytest.raises(fslpath.PathError):
featanalysis.getClusterMaskFile(featdir, ci)
featanalysis.getClusterMaskFile(featdir, ci)
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