Commits · 45fbd5c2509d1f021c0d93868b97c15ca960081c · Michiel Cottaar / fslpy

28 Mar, 2020 8 commits
- DOC: changelog · 45fbd5c2
  Paul McCarthy authored Mar 28, 2020
  
  45fbd5c2
- MNT: pre-release version bump · dcdaa020
  Paul McCarthy authored Mar 28, 2020
  
  dcdaa020
- DOC: changelog · fcbc17cd
  Paul McCarthy authored Mar 28, 2020
  
  fcbc17cd
- MNT: Aah. Remove all the deprecated things. · 630b9e1a
  Paul McCarthy authored Mar 28, 2020
  
  630b9e1a
- DOC: changelog · 7c0b28e2
  Paul McCarthy authored Mar 28, 2020
  
  7c0b28e2
- RF: Loaded wrapper outputs are named sensibly when possible · c53e6122
  Paul McCarthy authored Mar 28, 2020
  
  c53e6122
- RF: make FileOrThing+Results classes "public:, for type testing · 96736732
  Paul McCarthy authored Mar 28, 2020
  
  96736732
- RF: make option dicts class attributes · 346147da
  Paul McCarthy authored Mar 28, 2020
  
  346147da
27 Mar, 2020 24 commits
- DOC: changelog · 2583c861
  Paul McCarthy authored Mar 27, 2020
  
  2583c861
- TEST: edge cases · 29e0af81
  Paul McCarthy authored Mar 27, 2020
  
  29e0af81
- RF: Handle -t/-K for 3D images/single label · 6e91d3fb
  Paul McCarthy authored Mar 27, 2020
  
  6e91d3fb
- DOC: changelog · b8a733e9
  Paul McCarthy authored Mar 27, 2020
  
  b8a733e9
- TEST: test fslstats wrapper · 7485f176
  Paul McCarthy authored Mar 27, 2020
  
  7485f176
- RF: Hook to get the raw output, for testing · 195cb21f
  Paul McCarthy authored Mar 27, 2020
  
  195cb21f
- TEST: separate package for wrappers · af378e58
  Paul McCarthy authored Mar 27, 2020
  
  af378e58
- RF: fslstats returns a numpy array instead of lists · 17e02232
  Paul McCarthy authored Mar 27, 2020
  
  17e02232
- DOC: fslstats example · c383e2d3
  Paul McCarthy authored Mar 27, 2020
  
  c383e2d3
- DOC: changelog · cfe91952
  Paul McCarthy authored Mar 26, 2020
  
  cfe91952
- ENH: fslstats wrapper. Needs tweaking/testing · d1ed8be7
  Paul McCarthy authored Mar 26, 2020
  
  d1ed8be7
- RF: Allow passing log=None · 2fce4822
  Paul McCarthy authored Mar 26, 2020
  
  2fce4822
- Merge branch 'no_partial_fill' into 'master' · 85609e78
  Paul McCarthy authored Mar 27, 2020
```
REF: set partial_fill to False again

See merge request fsl/fslpy!218
```
  85609e78
- Merge branch 'filetree_json' into 'master' · 497e0a33
  Paul McCarthy authored Mar 27, 2020
```
ENH: I/O to of filetree to JSON files

See merge request fsl/fslpy!216
```
  497e0a33
- Merge branch 'enh/fslsub' into 'master' · d30bfc33
  Paul McCarthy authored Mar 27, 2020
```
Enh/fslsub

See merge request fsl/fslpy!215
```
  d30bfc33
- REF: set partial_fill to False again · 2211bbd6
  Michiel Cottaar authored Mar 27, 2020
```
Still using `partial_fill` when creating FileTreeQuery
```
  2211bbd6
- BUG: produce prettier JSON · 998165d7
  Michiel Cottaar authored Mar 27, 2020
  
  998165d7
- TEST: SubmitParams no work if fsl_sub doesn't exist · dfa51e0f
  Paul McCarthy authored Mar 27, 2020
  
  dfa51e0f
- BF: Minor fixes · e7c48926
  Paul McCarthy authored Mar 27, 2020
  
  e7c48926
- MNT: drop py35/36 · 06a86eb7
  Paul McCarthy authored Mar 27, 2020
  
  06a86eb7
- CI: drop py36 · 980467b1
  Paul McCarthy authored Mar 27, 2020
  
  980467b1
- ENH: I/O to of filetree to JSON files · 4147343d
  Michiel Cottaar authored Mar 27, 2020
```
Added test for I/O to both JSON and pickle files
```
  4147343d
- DOC: changelog · 3ad27fa9
  Paul McCarthy authored Mar 27, 2020
  
  3ad27fa9
- TEST: update fslsub test (a change in my dev environment?) · 97363253
  Paul McCarthy authored Mar 27, 2020
  
  97363253
26 Mar, 2020 3 commits
- BUG: open output pickle file as writable · 833be15c
  Michiel Cottaar authored Mar 26, 2020
  
  833be15c
- BUG: Make SubmitParams compatible with existing code · c1a2c2e5
  Michiel Cottaar authored Mar 26, 2020
```
Also added test for add_to_parser
```
  c1a2c2e5
- Copied in SubmitParams from mcutils · 651cd844
  Michiel Cottaar authored Mar 18, 2020
  
  651cd844
24 Mar, 2020 5 commits
- Merge branch 'enh/nonlinear' into 'master' · dd48efe0
  Paul McCarthy authored Mar 24, 2020
```
Enh/nonlinear

See merge request fsl/fslpy!212
```
  dd48efe0
- TEST: single set of coords · ff0a371b
  Paul McCarthy authored Mar 24, 2020
  
  ff0a371b
- DOC: changelog · 3017d553
  Paul McCarthy authored Mar 24, 2020
  
  3017d553
- BF: DeformationField.transform works with single set of coords · 23ff16c8
  Paul McCarthy authored Mar 24, 2020
  
  23ff16c8
- Merge branch 'enh/nonlinear' into 'master' · 0e5e0aa7
  Paul McCarthy authored Mar 24, 2020
```
Enh/nonlinear

See merge request fsl/fslpy!211
```
  0e5e0aa7