Commits · 797159e2e32c4597ece23d927d3d21ee4f959ed3 · Michiel Cottaar / fslpy

20 Jan, 2021 1 commit
- DOC: Fix date [skip ci] · 797159e2
  Paul McCarthy authored Jan 20, 2021
  
  797159e2
19 Jan, 2021 7 commits
- Merge branch 'rf/wsl-popen' into 'master' · 73fb2827
  Paul McCarthy authored Jan 19, 2021
```
Adjust fsl.utils.run.run to workaround Windows issue

See merge request fsl/fslpy!272
```
  73fb2827
- MNT: Pre-minor-release-version-bump [skip ci] · 1524145f
  Paul McCarthy authored Jan 19, 2021
  
  1524145f
- DOC: Various small updates, aim to release tonight · 3fd32ad2
  Paul McCarthy authored Jan 19, 2021
  
  3fd32ad2
- CI: Test against py39 · d9a253cb
  Paul McCarthy authored Jan 19, 2021
  
  d9a253cb
- TEST: Work around dcm2niix weirdnesses - an older version appears to have gone · ea332776
  Paul McCarthy authored Jan 19, 2021
```
missing from github, even older versions produce different numbers of series
from a dicom dir, and different numbers of images from a series, and the
newest version produces carets instead of underscores.
```
  ea332776
- DOC: Changelog [skip ci] · 71e42204
  Paul McCarthy authored Jan 19, 2021
  
  71e42204
- Modify Popen call under WSL to prevent opening of a console window · 10dd3f99
  Martin Craig authored Jan 19, 2021
```
Without this any FSL call under Windows opens potentially multiple
transient console windows which is distracting and slows down
performance
```
  10dd3f99
07 Dec, 2020 2 commits
- Merge branch 'evan-patch-smooth' into 'master' · 57348825
  Paul McCarthy authored Dec 07, 2020
```
ENH: add fslmaths simple smoothing

See merge request fsl/fslpy!271
```
  57348825
- ENH: add fslmaths simple smoothing · 75ed6335
  Evan Edmond authored Dec 07, 2020 and Paul McCarthy committed Dec 07, 2020
  
  75ed6335
26 Nov, 2020 4 commits
- Merge branch 'evan-doc-filetree' into 'master' · 990f1d94
  Paul McCarthy authored Nov 26, 2020
```
DOC: filetree docs [skip-ci]

See merge request fsl/fslpy!267
```
  990f1d94
- Apply 1 suggestion(s) to 1 file(s) · e942729c
  Evan Edmond authored Nov 26, 2020
  
  e942729c
- Update __init__.py · 5e7f6f37
  Evan Edmond authored Nov 26, 2020
  
  5e7f6f37
- DOC: filetree docs [skip-ci] · 967cc62e
  Evan Edmond authored Nov 26, 2020
  
  967cc62e
25 Nov, 2020 7 commits
- Merge branch 'evan-patch-fmap' into 'master' · 9db1e57e
  Paul McCarthy authored Nov 25, 2020
```
ENH: wrapper and test for fsl_prepare_fieldmap

See merge request fsl/fslpy!265
```
  9db1e57e
- Merge branch 'evan-patch-filetree-2' into 'master' · 3cf668d1
  Paul McCarthy authored Nov 25, 2020
```
ENH: add .tree file for fsl_anat

See merge request fsl/fslpy!264
```
  3cf668d1
- ENH: generic fsl_anat file tree · 30b9086b
  Evan Edmond authored Nov 25, 2020
  
  30b9086b
- ENH: <scanner> defaults to 'SIEMENS' · d57adba3
  Evan Edmond authored Nov 25, 2020
  
  d57adba3
- ENH: wrapper and test for fsl_prepare_fieldmap · 3dcfedbf
  Evan Edmond authored Nov 25, 2020
  
  3dcfedbf
- ENH: fsl_anat tree file · 1a1b0751
  Evan Edmond authored Nov 25, 2020
  
  1a1b0751
- ENH: fsl_anat tree file · 72670754
  Evan Edmond authored Nov 25, 2020
  
  72670754
11 Nov, 2020 2 commits
- Merge branch 'patch-1' into 'master' · 8e6af3ea
  Paul McCarthy authored Nov 11, 2020
```
DOC: fixed typo (bed instead of bet) in __init__.py

See merge request fsl/fslpy!262
```
  8e6af3ea
- DOC: fixed typo (bed instead of bet) in __init__.py · 0d131298
  Evan Edmond authored Nov 11, 2020
  
  0d131298
20 Oct, 2020 12 commits
- Merge branch 'enh/tbss_wrappers' into 'master' · 9d8fb91a
  Paul McCarthy authored Oct 20, 2020
```
Enh/tbss wrappers

See merge request fsl/fslpy!260
```
  9d8fb91a
- DOC: new stub for tbss mod · 2e878669
  Paul McCarthy authored Oct 20, 2020
  
  2e878669
- MNT: Pre-emptive version bump · 065c6b5a
  Paul McCarthy authored Oct 20, 2020
  
  065c6b5a
- RF: Change re-entrancy logic of disabled ctx manager so that, if · bef65e56
  Paul McCarthy authored Oct 20, 2020
  
  bef65e56
- DOC: author [skip ci] · 750e46d8
  Paul McCarthy authored Oct 20, 2020
  
  750e46d8
- DOC: changelog · 7ebfe017
  Paul McCarthy authored Oct 20, 2020
  
  7ebfe017
- TEST: test that assertions are disabled with cmdonly=True · e940d19a
  Paul McCarthy authored Oct 20, 2020
  
  e940d19a
- RF: when cmdonly is used with a wrapper function, assertions are disabled · 3ebae6b1
  Paul McCarthy authored Oct 20, 2020
  
  3ebae6b1
- TEST: Unit tests for tbss wrappers · c63dc780
  Paul McCarthy authored Oct 20, 2020
  
  c63dc780
- RF: Make tbss available at fsl.wrappers package level, minor clean ups · d99bff5f
  Paul McCarthy authored Oct 20, 2020
  
  d99bff5f
- ENH: Wrappers for tbss scripts · 27fb3a8b
  Evan Edmond authored Oct 19, 2020 and Paul McCarthy committed Oct 20, 2020
  
  27fb3a8b
- Merge branch 'mnt/recover' into 'master' · ded1c5af
  Paul McCarthy authored Oct 20, 2020
```
Mnt/recover

See merge request fsl/fslpy!258
```
  ded1c5af
13 Oct, 2020 4 commits
- Merge branch 'rf/cmdonly' into 'master' · 774d7b59
  Paul McCarthy authored Oct 13, 2020
```
Rf/cmdonly

See merge request fsl/fslpy!259
```
  774d7b59
- TEST: Missed assert; make sure fileorthing handles cmdonly, and cmdonly works · 8a9b2c75
  Paul McCarthy authored Oct 13, 2020
```
when combining fileorthing and cmdwrapper
```
  8a9b2c75
- DOC: changelog · df13ddbd
  Paul McCarthy authored Oct 13, 2020
  
  df13ddbd
- RF: FileOrThing passes through if cmdonly=True · 114783ae
  Paul McCarthy authored Oct 13, 2020
  
  114783ae
12 Oct, 2020 1 commit
- Merge branch 'enh/wrapper_cmdonly' into 'master' · 111c77a0
  Paul McCarthy authored Oct 12, 2020
```
Enh/wrapper cmdonly

See merge request fsl/fslpy!257
```
  111c77a0