RF: Widespread refactorings, with the aim of making the fsl/win-pytreat

repository independent of any specific pytreat.

Pandas talk migrated to applications/pandas/.

fslpy practical migrated to applications/fsply/.

Python introduction talk migrated to getting_started/00_overview

README.md

 # WIN PyTreat seriesx
 
 
-This repository contains Jupyter notebooks and data for the WIN PyTreat series.
-It contains the following:
-
-- The `talks` directory contains a series of _Topyc_ talks that have been/will
-  be given during the PyTreat.
+This repository contains Python practicals for the WIN PyTreat series.  It
+contains the following:
 
 - The `getting_started` directory contains a series of practicals intended
   for those of you who are new to the Python programming language, or need
   a refresher.
 
-- The `advanced_topics` directory contains a series of practicals on various
-  aspects of the Python programming language - these are intended for those
-  of you who are familiar with the basics of Python, and want to learn more
-  about the language.
+- The `advanced_programming` directory contains a series of practicals on
+  various aspects of the Python programming language - these are intended for
+  those of you who are familiar with the basics of Python, and want to learn
+  more about the language.
 
 - The `applications` directory contains a series of practicals which focus
   on using Python to accomplish specific tasks.
 
-The practicals have been written under the assumption that FSL 6.0.3 is
+The practicals have been written under the assumption that FSL 6.0.4 is
 installed.
 
 
@@ -36,23 +33,8 @@ fslpython -m notebook
 ```
 
 A page should open in your web browser - to access the practicals, navigate
-into one of the `getting_started` or `advanced_topics` directories, and click
-on the `.ipynb` file you are interested in. Some of the talks are also
-presented in notebook form - navigate to the talk you are interested in
-(within the `talks` directory), and click on the `.ipynb` file to follow
-along.
-
-
-Throughout the week we might make changes to this repository. When this
-happens, we will ask you to update your local clone of the repository with the
-following command:
-
-
-```
-git stash save
-git pull origin master
-git stash pop
-```
+into one of the `getting_started`, `advanced_programming`, or `applications`
+directories, and click on the `.ipynb` file you are interested in.
 
 
 Have fun!
@@ -61,18 +43,14 @@ Have fun!
 ## For contributors
 
 
-**IMPORTANT** Temporarily hosting at https://github.com/pauldmccarthy/win-pytreat, instead
-of https://git.fmrib.ox.ac.uk/fsl/win-pytreat
-
-
-The main repository can be found at:
+The main Pytreat practical repository can be found at:
 
 https://git.fmrib.ox.ac.uk/fsl/win-pytreat
 
 
 Updates to the master branch should occur via merge requests. You can choose
-to either work on a branch within this repository  (recommended), or on a fork of this
-repository (advanced).
+to either work on a branch within this repository (recommended), or on a fork
+of this repository (advanced).
 
 ### Using a branch within this repository (recommended)
 

advanced_topics/README.md → advanced_programming/README.md

@@ -9,10 +9,11 @@ some of the more advanced features of the language.
 Practicals on the following topics are available. They can be viewed in any
 order, but we recommend going through them in this order:
 
-1. Function inputs and outputs
-2. Modules and packages
-3. Object-oriented programming
-4. Operator overloading
-5. Context managers
-6. Decorators
-7. Threading and parallel processing
+1. Function inputs and outputs (`function_inputs_and_outputs.ipynb`)
+2. Modules and packages (`modules_and_packages.ipynb`)
+3. Object-oriented programming (`object_oriented_programming.ipynb`)
+4. Operator overloading (`operator_overloading.ipynb`)
+5. Context managers (`context_managers.ipynb`)
+6. Decorators (`decorators.ipynb`)
+7. Threading and parallel processing (`threading.ipynb`)
+8. Structuring projects (`structuring_projects.ipynb`)