conf.py 11 KB
 Paul McCarthy committed Jul 09, 2014 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 # -*- coding: utf-8 -*- # # FSLpy documentation build configuration file, created by # sphinx-quickstart on Sun Jun 29 10:42:08 2014. # # This file is execfile()d with the current directory set to its # containing dir. # # Note that not all possible configuration values are present in this # autogenerated file. # # All configuration values have a default; values that are commented out # serve to show the default. import os  Paul McCarthy committed Jan 26, 2016 16 17 18 19 import sys import datetime date = datetime.date.today()  Paul McCarthy committed Jul 09, 2014 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35  # If extensions (or modules to document with autodoc) are in another directory, # add these directories to sys.path here. If the directory is relative to the # documentation root, use os.path.abspath to make it absolute, like shown here. #sys.path.insert(0, os.path.abspath('.')) # -- General configuration ------------------------------------------------ # If your documentation needs a minimal Sphinx version, state it here. #needs_sphinx = '1.0' # Add any Sphinx extension module names here, as strings. They can be # extensions coming with Sphinx (named 'sphinx.ext.*') or your custom # ones. extensions = [ 'sphinx.ext.autodoc',  Paul McCarthy committed Jul 23, 2019 36  'sphinx.ext.viewcode',  Paul McCarthy committed Jul 23, 2019 37  'sphinx.ext.autosummary',  Paul McCarthy committed Aug 28, 2015 38  'sphinx.ext.mathjax',  Paul McCarthy committed Sep 02, 2015 39  'sphinx.ext.graphviz',  Paul McCarthy committed Sep 04, 2015 40  'sphinx.ext.todo',  Paul McCarthy committed Jul 09, 2014 41 42 ]  Paul McCarthy committed Sep 04, 2015 43 44 todo_include_todos = True  Paul McCarthy committed Jul 09, 2014 45 46 47 48 49 50 51 52 53 54 # Add any paths that contain templates here, relative to this directory. templates_path = ['_templates'] # The suffix of source filenames. source_suffix = '.rst' # The encoding of source files. #source_encoding = 'utf-8-sig' # The master toctree document.  Paul McCarthy committed Nov 07, 2016 55 master_doc = 'index'  Paul McCarthy committed Jul 09, 2014 56 57  # General information about the project.  Paul McCarthy committed Aug 28, 2015 58 project = u'fslpy'  Paul McCarthy committed Mar 18, 2020 59 copyright = u'{}, FMRIB Centre, University of Oxford, Oxford, UK'.format(  Paul McCarthy committed Nov 04, 2016 60  date.year)  Paul McCarthy committed Jul 09, 2014 61   Paul McCarthy committed Nov 07, 2016 62 63 # Links to other things rst_epilog = """  Paul McCarthy committed Nov 07, 2016 64 .. |fsleyes_apidoc| replace:: FSLeyes  Paul McCarthy committed Oct 07, 2019 65 .. _fsleyes_apidoc: http://users.fmrib.ox.ac.uk/~paulmc/fsleyes/userdoc/latest/index.html  Paul McCarthy committed Nov 07, 2016 66 67 68 """  Paul McCarthy committed Jul 09, 2014 69 70 71 72 73 # The version info for the project you're documenting, acts as replacement for # |version| and |release|, also used in various other places throughout the # built documents. # # The short X.Y version.  Paul McCarthy committed Mar 08, 2016 74 75 76 import fsl.version as fslversion version = fslversion.__version__  Paul McCarthy committed Jul 09, 2014 77 # The full version, including alpha/beta/rc tags.  Paul McCarthy committed May 09, 2016 78 release = '{}'.format(version, fslversion.__version__)  Paul McCarthy committed Jul 09, 2014 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122  # The language for content autogenerated by Sphinx. Refer to documentation # for a list of supported languages. #language = None # There are two options for replacing |today|: either, you set today to some # non-false value, then it is used: #today = '' # Else, today_fmt is used as the format for a strftime call. #today_fmt = '%B %d, %Y' # List of patterns, relative to source directory, that match files and # directories to ignore when looking for source files. exclude_patterns = ['_build'] # The reST default role (used for this markup: text) to use for all # documents. #default_role = None # If true, '()' will be appended to :func: etc. cross-reference text. #add_function_parentheses = True # If true, the current module name will be prepended to all description # unit titles (such as .. function::). #add_module_names = True # If true, sectionauthor and moduleauthor directives will be shown in the # output. They are ignored by default. #show_authors = False # The name of the Pygments (syntax highlighting) style to use. pygments_style = 'sphinx' # A list of ignored prefixes for module index sorting. #modindex_common_prefix = [] # If true, keep warnings as "system message" paragraphs in the built documents. #keep_warnings = False # -- Options for HTML output ---------------------------------------------- # The theme to use for HTML and HTML Help pages. See the documentation for # a list of builtin themes.  Paul McCarthy committed Aug 28, 2015 123 html_theme = 'sphinx_rtd_theme'  Paul McCarthy committed Jul 09, 2014 124   Paul McCarthy committed Jul 23, 2019 125   Paul McCarthy committed Jul 09, 2014 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 # Theme options are theme-specific and customize the look and feel of a theme # further. For a list of options available for each theme, see the # documentation. #html_theme_options = {} # Add any paths that contain custom themes here, relative to this directory. #html_theme_path = [] # The name for this set of Sphinx documents. If None, it defaults to # " v documentation". #html_title = None # A shorter title for the navigation bar. Default is the same as html_title. #html_short_title = None # The name of an image file (relative to this directory) to place at the top # of the sidebar. #html_logo = None # The name of an image file (within the static path) to use as favicon of the # docs. This file should be a Windows icon file (.ico) being 16x16 or 32x32 # pixels large. #html_favicon = None # Add any paths that contain custom static files (such as style sheets) here, # relative to this directory. They are copied after the builtin static files, # so a file named "default.css" will overwrite the builtin "default.css".  Paul McCarthy committed Jul 23, 2019 153 154 155 156 157 158 159 html_static_path = ['_static'] html_context = { 'css_files': [ '_static/theme_overrides.css', # overrides for wide tables in RTD theme ], }  Paul McCarthy committed Jul 09, 2014 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207  # Add any extra paths that contain custom files (such as robots.txt or # .htaccess) here, relative to this directory. These files are copied # directly to the root of the documentation. #html_extra_path = [] # If not '', a 'Last updated on:' timestamp is inserted at every page bottom, # using the given strftime format. #html_last_updated_fmt = '%b %d, %Y' # If true, SmartyPants will be used to convert quotes and dashes to # typographically correct entities. #html_use_smartypants = True # Custom sidebar templates, maps document names to template names. #html_sidebars = {} # Additional templates that should be rendered to pages, maps page names to # template names. #html_additional_pages = {} # If false, no module index is generated. #html_domain_indices = True # If false, no index is generated. #html_use_index = True # If true, the index is split into individual pages for each letter. #html_split_index = False # If true, links to the reST sources are added to the pages. #html_show_sourcelink = True # If true, "Created using Sphinx" is shown in the HTML footer. Default is True. #html_show_sphinx = True # If true, "(C) Copyright ..." is shown in the HTML footer. Default is True. #html_show_copyright = True # If true, an OpenSearch description file will be output, and all pages will # contain a tag referring to it. The value of this option must be the # base URL from which the finished HTML is served. #html_use_opensearch = '' # This is the file name suffix for HTML files (e.g. ".xhtml"). #html_file_suffix = None # Output file base name for HTML help builder.  Paul McCarthy committed Aug 28, 2015 208 htmlhelp_basename = 'fslpydoc'  Paul McCarthy committed Jul 09, 2014 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295  # -- Options for LaTeX output --------------------------------------------- latex_elements = { # The paper size ('letterpaper' or 'a4paper'). #'papersize': 'letterpaper', # The font size ('10pt', '11pt' or '12pt'). #'pointsize': '10pt', # Additional stuff for the LaTeX preamble. #'preamble': '', } # Grouping the document tree into LaTeX files. List of tuples # (source start file, target name, title, # author, documentclass [howto, manual, or own class]). latex_documents = [ ('index', 'FSLpy.tex', u'FSLpy Documentation', u'Paul McCarthy', 'manual'), ] # The name of an image file (relative to this directory) to place at the top of # the title page. #latex_logo = None # For "manual" documents, if this is true, then toplevel headings are parts, # not chapters. #latex_use_parts = False # If true, show page references after internal links. #latex_show_pagerefs = False # If true, show URL addresses after external links. #latex_show_urls = False # Documents to append as an appendix to all manuals. #latex_appendices = [] # If false, no module index is generated. #latex_domain_indices = True # -- Options for manual page output --------------------------------------- # One entry per manual page. List of tuples # (source start file, name, description, authors, manual section). man_pages = [ ('index', 'fslpy', u'FSLpy Documentation', [u'Paul McCarthy'], 1) ] # If true, show URL addresses after external links. #man_show_urls = False # -- Options for Texinfo output ------------------------------------------- # Grouping the document tree into Texinfo files. List of tuples # (source start file, target name, title, author, # dir menu entry, description, category) texinfo_documents = [ ('index', 'FSLpy', u'FSLpy Documentation', u'Paul McCarthy', 'FSLpy', 'One line description of project.', 'Miscellaneous'), ] # Documents to append as an appendix to all manuals. #texinfo_appendices = [] # If false, no module index is generated. #texinfo_domain_indices = True # How to display URL addresses: 'footnote', 'no', or 'inline'. #texinfo_show_urls = 'footnote' # If true, do not generate a @detailmenu in the "Top" node's menu. #texinfo_no_detailmenu = False # -- Options for Epub output ---------------------------------------------- # Bibliographic Dublin Core info. epub_title = u'FSLpy' epub_author = u'Paul McCarthy' epub_publisher = u'Paul McCarthy'  Paul McCarthy committed Mar 08, 2016 296 epub_copyright = u'{}, Paul McCarthy, FMRIB Centre, Oxford'.format(date.year)  Paul McCarthy committed Jul 09, 2014 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358  # The basename for the epub file. It defaults to the project name. #epub_basename = u'FSLpy' # The HTML theme for the epub output. Since the default themes are not optimized # for small screen space, using the same theme for HTML and epub output is # usually not wise. This defaults to 'epub', a theme designed to save visual # space. #epub_theme = 'epub' # The language of the text. It defaults to the language option # or en if the language is not set. #epub_language = '' # The scheme of the identifier. Typical schemes are ISBN or URL. #epub_scheme = '' # The unique identifier of the text. This can be a ISBN number # or the project homepage. #epub_identifier = '' # A unique identification for the text. #epub_uid = '' # A tuple containing the cover image and cover page html template filenames. #epub_cover = () # A sequence of (type, uri, title) tuples for the guide element of content.opf. #epub_guide = () # HTML files that should be inserted before the pages created by sphinx. # The format is a list of tuples containing the path and title. #epub_pre_files = [] # HTML files shat should be inserted after the pages created by sphinx. # The format is a list of tuples containing the path and title. #epub_post_files = [] # A list of files that should not be packed into the epub file. epub_exclude_files = ['search.html'] # The depth of the table of contents in toc.ncx. #epub_tocdepth = 3 # Allow duplicate toc entries. #epub_tocdup = True # Choose between 'default' and 'includehidden'. #epub_tocscope = 'default' # Fix unsupported image types using the PIL. #epub_fix_images = False # Scale large images. #epub_max_image_width = 0 # How to display URL addresses: 'footnote', 'no', or 'inline'. #epub_show_urls = 'inline' # If false, no index is generated. #epub_use_index = True  Paul McCarthy committed Sep 11, 2015 359 360 361 362 # Show the class level docstring # (__init__ is documented via the # special-members flag) autoclass_content = 'class'  Paul McCarthy committed Jul 09, 2014 363 364   Paul McCarthy committed Jun 23, 2020 365 366 367 368 369 370 autodoc_default_options = { 'special-members' : True, 'private-members' : True, 'undoc-members' : True, 'member-order' : 'bysource', }  Paul McCarthy committed Jan 29, 2016 371 372  graphviz_output_format = 'svg'