Commits · master · Sean Fitzgibbon / pyfix

26 Jul, 2022 1 commit
- Added .gitignore · 71e862ac
  Sean Fitzgibbon authored Jul 26, 2022
  
  71e862ac
06 Apr, 2021 4 commits
- Merge branch 'psyc1435-master-patch-73592' into 'master' · 11387444
  Sean Fitzgibbon authored Apr 06, 2021
```
fix feature labels in report_loo

See merge request !1
```
  11387444
- fix feature labels in report_loo · 2e55411e
  Mats Van Es authored Apr 06, 2021
  
  2e55411e
- Determine labels from data in calculate_loo_metrics · 74ca7e25
  Sean Fitzgibbon authored Apr 06, 2021
  
  74ca7e25
- Added labels to confusion matrix construction · 4df5effe
  Sean Fitzgibbon authored Apr 06, 2021
```
Removed roc_auc_score as default metric because it cannot handle the situation where the classication only contains a single class.
Convert TPR/TNR to zero when it is a nan due to divide by zero.
```
  4df5effe
01 Apr, 2021 3 commits
- added training_report_template.html · e1b179e1
  Sean Fitzgibbon authored Apr 01, 2021
  
  e1b179e1
- added report_loo example · 041f8b04
  Sean Fitzgibbon authored Apr 01, 2021
  
  041f8b04
- Added report_loo function · bb2a0c30
  Sean Fitzgibbon authored Apr 01, 2021
  
  bb2a0c30
31 Mar, 2021 6 commits
- Updated for new LooResults dataclass · 75024d8d
  Sean Fitzgibbon authored Mar 31, 2021
  
  75024d8d
- Added support for permutation feature importance and LooResults dataclass · 97d56468
  Sean Fitzgibbon authored Mar 31, 2021
  
  97d56468
- added json read/write support · dd45bb7d
  Sean Fitzgibbon authored Mar 31, 2021
  
  dd45bb7d
- added specific scikit-learn version requirement · bed74363
  Sean Fitzgibbon authored Mar 31, 2021
  
  bed74363
- correctly handle current directory · 0c256cb4
  Sean Fitzgibbon authored Mar 31, 2021
  
  0c256cb4
- Minor code cleanup · faf8738e
  Sean Fitzgibbon authored Mar 31, 2021
  
  faf8738e
11 Mar, 2021 3 commits
- updated README.md · 842c7f73
  Sean Fitzgibbon authored Mar 11, 2021
  
  842c7f73
- Updated README.md · b6528378
  Sean Fitzgibbon authored Mar 11, 2021
  
  b6528378
- code reformat · 75158bbc
  Sean Fitzgibbon authored Mar 11, 2021
  
  75158bbc
02 Mar, 2021 1 commit
- Changed default classifier to SVM · 30437558
  Sean Fitzgibbon authored Mar 02, 2021
  
  30437558
26 Feb, 2021 5 commits
- fixed docs typo · 3698862b
  Sean Fitzgibbon authored Feb 26, 2021
  
  3698862b
- updated README.md · 1997b450
  Sean Fitzgibbon authored Feb 26, 2021
  
  1997b450
- removed old examples · e0893902
  Sean Fitzgibbon authored Feb 26, 2021
  
  e0893902
- Added additional fMRI examples · 0575a3b1
  Sean Fitzgibbon authored Feb 26, 2021
  
  0575a3b1
- bugfixes · e7ae1d97
  Sean Fitzgibbon authored Feb 26, 2021
  
  e7ae1d97
25 Feb, 2021 9 commits
- removed redundant call to filetree · 4fa66eea
  Sean Fitzgibbon authored Feb 25, 2021
  
  4fa66eea
- Added package data to setup file · 3e678987
  Sean Fitzgibbon authored Feb 25, 2021
  
  3e678987
- removed circular import introduced by a refactor · b7b6c338
  Sean Fitzgibbon authored Feb 25, 2021
  
  b7b6c338
- Added legacy classification metrics and reporting · bbdc06aa
  Sean Fitzgibbon authored Feb 25, 2021
  
  bbdc06aa
- Added support for loading motion parameters of various types · c6665b0b
  Sean Fitzgibbon authored Feb 25, 2021
  
  c6665b0b
- Complete drop-in replacement script for legacy FIX · 027ba494
  Sean Fitzgibbon authored Feb 25, 2021
  
  027ba494
- Better motion paramater handling that does not pollute the feat/melodic directory · d7eb3c0a
  Sean Fitzgibbon authored Feb 25, 2021
  
  d7eb3c0a
- updated training and classification code that now uses probablistic outputs · fff0e799
  Sean Fitzgibbon authored Feb 25, 2021
  
  fff0e799
- complete rewrite of clean.py · f02c491b
  Sean Fitzgibbon authored Feb 25, 2021
  
  f02c491b
16 Feb, 2021 3 commits
- Only at features filename if not already specified · fdfbd927
  Sean Fitzgibbon authored Feb 16, 2021
  
  fdfbd927
- Fixed bug that may cause crash if the basename is in the local directory · 1d25db4c
  Sean Fitzgibbon authored Feb 16, 2021
  
  1d25db4c
- Removed melodic directory checks as they are too stringent and check for files not required by FIX · 71d72085
  Sean Fitzgibbon authored Feb 16, 2021
  
  71d72085
11 Feb, 2021 4 commits
- imrm was causing a problem on some platforms. Replaced with os.remove · 13286b4b
  Sean Fitzgibbon authored Feb 11, 2021
  
  13286b4b
- Fixed crash caused by attempting to write log to non-existent directory · 5669181a
  Sean Fitzgibbon authored Feb 11, 2021
  
  5669181a
- renamed fix.py to fix · ae957368
  Sean Fitzgibbon authored Feb 11, 2021
  
  ae957368
- renamed fix.py to fix · bea3fd6c
  Sean Fitzgibbon authored Feb 11, 2021
  
  bea3fd6c
10 Feb, 2021 1 commit
- Code tidy and modification to how motion parameters are handled for legacy HCP-FIX compatibility · 277f7014
  Sean Fitzgibbon authored Feb 10, 2021
  
  277f7014