Commits · b8babe8787fa1e92747513d095d90d4b562bae0f · Sean Fitzgibbon / SlideR 🍔

21 Dec, 2021 3 commits
- Added additional preprocessing to _img_props · b8babe87
  Sean Fitzgibbon authored Dec 21, 2021
  
  b8babe87
- changed affine to rigid · 410f89aa
  Sean Fitzgibbon authored Dec 21, 2021
  
  410f89aa
- bugfix in neurolucida reader · dfcb8b76
  Sean Fitzgibbon authored Dec 21, 2021
  
  dfcb8b76
05 Nov, 2021 1 commit
- Added support for other file formats to APPLYXFM · 8c599e4c
  Sean Fitzgibbon authored Nov 05, 2021
  
  8c599e4c
04 Nov, 2021 2 commits
- Added improved masking and some temporary debugging code · f7da6821
  Sean Fitzgibbon authored Nov 04, 2021
  
  f7da6821
- corrected input data types in config · 944d74f5
  Sean Fitzgibbon authored Nov 04, 2021
  
  944d74f5
03 Aug, 2021 4 commits
- added config with masking · de99b27e
  Sean Fitzgibbon authored Aug 03, 2021
  
  de99b27e
- exposed nonlinear maskmode to config · 08b9a447
  Sean Fitzgibbon authored Aug 03, 2021
  
  08b9a447
- tweaked default export options · 92e06e96
  Sean Fitzgibbon authored Aug 03, 2021
  
  92e06e96
- Added ability not to save intermediate TIMGs · 227994d2
  Sean Fitzgibbon authored Aug 03, 2021
  
  227994d2
02 Aug, 2021 1 commit
- updated some defaults · ca926c2c
  Sean Fitzgibbon authored Aug 02, 2021
  
  ca926c2c
29 Jul, 2021 6 commits
- Allow for repeat contours in neurolucida · 31b0b619
  Sean Fitzgibbon authored Jul 29, 2021
  
  31b0b619
- Fixed bug where BATCH might run SLIDE instead of APPLXFM · d1a2884e
  Sean Fitzgibbon authored Jul 29, 2021
  
  d1a2884e
- Added more files to be ignored · 221215a4
  Sean Fitzgibbon authored Jul 29, 2021
  
  221215a4
- Added support for masking using GMM · 64d74cdd
  Sean Fitzgibbon authored Jul 29, 2021
  
  64d74cdd
- fixed some help info · c6508b74
  Sean Fitzgibbon authored Jul 29, 2021
  
  c6508b74
- Add extension to outname if required · 5550deda
  Sean Fitzgibbon authored Jul 29, 2021
  
  5550deda
13 Jul, 2021 1 commit
- reformatting - no code changes · ff65be41
  Sean Fitzgibbon authored Jul 13, 2021
  
  ff65be41
29 Jun, 2021 1 commit
- Merge branch 'report' into 'master' · eb4d5877
  Sean Fitzgibbon authored Jun 29, 2021
```
Report

See merge request !1
```
  eb4d5877
24 Jun, 2021 3 commits
- Fixed bug where output directory was not created · cf4f1fd1
  Sean Fitzgibbon authored Jun 24, 2021
  
  cf4f1fd1
- Initial support of reporting · 08b157e8
  Sean Fitzgibbon authored Jun 24, 2021
  
  08b157e8
- Added alignment plot to slide_reg · b235e4ad
  Sean Fitzgibbon authored Jun 24, 2021
  
  b235e4ad
23 Jun, 2021 9 commits
- Updated README · c51b8c53
  Sean Fitzgibbon authored Jun 23, 2021
  
  c51b8c53
- Add resolution level to APPLYXFM · b9f4248e
  Sean Fitzgibbon authored Jun 23, 2021
  
  b9f4248e
- Updated README · f26f8195
  Sean Fitzgibbon authored Jun 23, 2021
  
  f26f8195
- Added alignment plot + bugfix · 557499bd
  Sean Fitzgibbon authored Jun 23, 2021
  
  557499bd
- Restored plots to chart_reg and fixed a bug · c99996d1
  Sean Fitzgibbon authored Jun 23, 2021
  
  c99996d1
- Added BATCH to usage · f94ac02e
  Sean Fitzgibbon authored Jun 23, 2021
  
  f94ac02e
- Add APPLYXFM support to BATCH · 62398b38
  Sean Fitzgibbon authored Jun 23, 2021
  
  62398b38
- Added CHART support to BATCH · 07b14343
  Sean Fitzgibbon authored Jun 23, 2021
  
  07b14343
- minor tweaks · 0c4baf32
  Sean Fitzgibbon authored Jun 23, 2021
  
  0c4baf32
22 Jun, 2021 9 commits
- Added initial support for batch · fd28830f
  Sean Fitzgibbon authored Jun 22, 2021
  
  fd28830f
- yaml bugfix · 5f10c7f7
  Sean Fitzgibbon authored Jun 22, 2021
  
  5f10c7f7
- Ported json config to yaml · 61b73395
  Sean Fitzgibbon authored Jun 22, 2021
  
  61b73395
- Added config to chart_reg · 98fec787
  Sean Fitzgibbon authored Jun 22, 2021
  
  98fec787
- Updated README · abf641c7
  Sean Fitzgibbon authored Jun 22, 2021
  
  abf641c7
- Updated readme · d92cec46
  Sean Fitzgibbon authored Jun 22, 2021
  
  d92cec46
- Improved CLI help · 24d8f069
  Sean Fitzgibbon authored Jun 22, 2021
  
  24d8f069
- Tidied code · fbba286c
  Sean Fitzgibbon authored Jun 22, 2021
  
  fbba286c
- Update README.md · 35d815d3
  Sean Fitzgibbon authored Jun 22, 2021
  
  35d815d3