Explore projects

The workshop would be split over three sessions of 2hrs duration over three consecutive weeks: Fundamentals of image analysis with DL, Intermediate session and project sessions.

online web viewer for xtract data

Scripts to support gridengine

Tensor Image Registration Library - a modular general-purpose image registration framework for Python with prebaked scripts for histology-to-MRI registration.

development of the process and decision tree for sharing data on the WIN XNAT server

Moved to https://git.fmrib.ox.ac.uk/profumo/profumo

minimal dockerised version of bet via the new FSL Conda packages

development of the process and decision tree for sharing data on the WIN XNAT server

Code replicating results from Tavor et al. 2016

FSL-MRS code for the 2021 diffusion weighted MRS workshop.

Additional large downloads required for the dHCP neonatal fMRI pipeline

Collection of pipelines for T2w, DWI and QSM imaging for Merima's studies.

The FSL Python Library

The FSL javascript package. It's full of helper functions to interface with FSL web-based GUIs