Explore projects

Compilation of practicals for thee Advanced Analysis part of the WIN@FMRIB Graduate Programme

Beta version of MMORF for internal FMRIB release.

Multimodal templates constructed by jointly optimising similarity across multiple scalar- and tensor-based modalities using MMORF for nonlinear registrations.

FSL Tools for MR Spectroscopy - Fitting/Plotting/Simulations/etc.

Educational material for the WIN Analysis Group

Various Regions of interest

FSLeyes, the FSL image viewer.

The FSL Python Library

Talks, practicals, and other materials for the 2020 WIN PyTreat

The FSL Evaluation and Example Data Suite (FEEDS), now in Python!

development of the process and decision tree for sharing data on the WIN XNAT server

The FMRIB UKBioBank Normalisation, Parsing And Cleaning Kit

This project will aim to address one of the big challenges in imaging-neuroscience: that of how a brain’s functional connectivity, represented by resting-state maps, can be predicted from structural connectivity information obtained from dw-MRI.

Code for inferring PRObabilistic FUnctional MOdes. See DOI: 10.1016/j.neuroimage.2015.01.013 and DOI: 10.1016/j.neuroimage.2020.117226.

Tensor Image Registration Library - a modular general-purpose image registration framework for Python with prebaked scripts for histology-to-MRI registration.

Pipeline for brain imaging processing of UK Biobank.

Pipeline developed by Fidel Alfaro Almagro, Steve Smith and Mark Jenkinson.

Contributions by FMRIB Analysis Group, University of Oxford.