Explore projects

The FSL Python Library

Triplanar U-Net ensemble network (TrUE-Net) model for WMH segmentation

IHC analysis tools for MRI-microscopy comparisons

My copy of FSL/base

Analysis pipeline used in the ‘Capturing MultiORgan Effects of COVID-19’ (C-MORE) study.

The legacy FSL installer script, used to install FSL versions 6.0.5.2 and older.

BRC-EM Transparent and Reproducible fMRI Analysis guide. Code and tutorials for analysis of a typical functional magnetic resonance imaging (fMRI) task data set collected as part of a study adopted by the University of Oxford Health Biomedical Research Centre (BRC) Experimental Medicine theme (BRC-EM).

Exploring, adapting, modifying the UK biobank imaging pipeline codes for the implementation on DPUK cohorts data

Taking AgeMapper to the next level - Multi(input)AgeMapper

Preprocessing weighted scans for preclinical Multi-Parameter Mapping

show how to install more FSL packages

Repository for code from 'Individual differences in slow wave sleep architecture relate to variation in white matter microstructure across adulthood' by Gudberg et al.