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Command line tool to scan a dataset and print a table highlighting gaps.

Neonatal diffusion MRI (dMRI) data analysis pipeline

FIX - FMRIB's ICA-based Xnoiseifier Gholamreza Salimi-Khorshidi and Stephen Smith, FMRIB Analysis Group MATLAB compilation/wrapper Duncan Mortimer Copyright (C) 2012-2019 University of Oxford

X-species automated tractography tool

This repository contains processing code for the following publication:

Eichert N, Papp D, Mars RB & Watkins KE (2020) Mapping human laryngeal motor cortex during vocalization. Cerebral Cortex (accepted).

Data processing pipeline for fixed, whole brain QSM and R2* mapping

The FSL Python Library

get a real dataset location from a dataset_loc.txt file in a zenodo repository. Useful for WIN DigitalBrainBank

Triplanar U-Net Ensemble model for white matter hyperintensities segmentation