Explore projects

This repository contains the E-Prime script and stimuli from the functional MRI task for the UK Biobank Brain Imaging study.

This flashing checkerboard script presents black screen vs flashing checkerboards in a block design. You will need a button box / gamepad device to trigger and record responses. Participant fixation is controlled via a simple fixation task.

files for the RSA tutorial

Psychtoolbox-based task: reprogramming behaviour with TMS triggers, based on Neubert et al., 2010

This is an open-source repository with the data supporting the publication "Manipulation of subcortical and deep cortical activity in the primate brain using transcranial focused ultrasound stimulation"

data repository supporting the publication "Offline impact of transcranial focused ultrasound on cortical activation in primates"

This project contains all the code for behavioural analysis of subject performance

Exploring machine learning methods, with special focus on the deep learning methods in order to attempt Neuroimage segmentation and analysis

Pandas tutorial for the analysis group meeting on November 21

Educational material for the WIN Analysis Group

CUSP : A C++ Templated Sparse Matrix Library

Computational modelling course taught as part of the WIN graduate programme.

Python-based asymmetric fibre orientation distributions (aFODs) estimation library

Pipeline for brain imaging processing of UK Biobank.

Pipeline developed by Fidel Alfaro Almagro, Steve Smith and Mark Jenkinson.

Contributions by FMRIB Analysis Group, University of Oxford.