Explore projects

Matlab code to perform Hidden Markov modelling of entorhinal cortex optogenetic-fMRI.

Latex code repo for various write-ups done during my DPhil

Beta version of MMORF for internal FMRIB release.

The FSL Python Library

Code to accompany Uncertainty in denoising of MRSI using low rank methods, Clarke WT and Chiew M 2021.

This repository contains the E-Prime script and stimuli from the functional MRI task for the UK Biobank Brain Imaging study.

Reads Siemens .dat 'twix' raw data files. Python port of Philipp Ehses' Matlab tool mapVBVD.

Analysis pipeline used in the ‘Capturing MultiORgan Effects of COVID-19’ (C-MORE) study.

Repository for code and materials from 'Reassessing associations between white matter and behaviour with multimodal microstructural imaging' by Lazari et al.

Repository associated with the following publication: Social prediction modulates activity of macaque superior temporal cortex Lea Roumazeilles, Matthias Schurz, et al

Jekyll just-the-docs theme example. Served at https://open.win.ox.ac.uk/pages/cassag/just-the-docs/