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MNT: Revert behaviour of `--version` so that it does not cause MMORF to exit

Paul McCarthyrequested to merge
mnt/revert-version-behaviour into master

In version 0.4.0, the behaviour of the --version flag was changed so that it would print the MMORF version number and then exit. This breaks compatibility with existing MMORF configuration files that contain version = true, so this MR reverts the behaviour.

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