fsl_sub 2.10.0 with improvements to parallelism within the shell plugin

Duncan Mortimerrequested to merge
duncan/fsl_sub:master into master
  • Shell plugin now uses all threads allocated to parent job when job submitted within a cluster submitted job
  • Thread control environment variables are set within shell runner tasks
  • Allow -s option to control threads in shell runner array tasks
  • Ensure automatic parallelism in shell runner when called by Python API
  • Add additional debug output
  • Fix debugging via environment variable
  • Fix deeply nested fsl_sub calls

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