Explore projects

Pipeline for brain imaging processing of UK Biobank.

Pipeline developed by Fidel Alfaro Almagro, Steve Smith and Mark Jenkinson.

Contributions by FMRIB Analysis Group, University of Oxford.

Collection of pipelines for T2w, DWI and QSM imaging for Merima's studies.

THIS REPOSITORY IS NO LONGER MAINTAINED - Docker images for FSLeyes testing are now stored in the fsl/fsleyes/fsleyes repository.

BRC-EM Transparent and Reproducible fMRI Analysis guide. Code and tutorials for analysis of a typical functional magnetic resonance imaging (fMRI) task data set collected as part of a study adopted by the University of Oxford Health Biomedical Research Centre (BRC) Experimental Medicine theme (BRC-EM).

Version 1.5 of the Pipeline for brain imaging processing of UK Biobank.

Pipeline developed by Fidel Alfaro Almagro, Steve Smith and Mark Jenkinson.

Contributions by FMRIB Analysis Group, University of Oxford.

Diffusion models implemented in the cudimot framework. See https://users.fmrib.ox.ac.uk/~moisesf/cudimot/ for more details.

Code for the generation, processing, and analysis of imaging confounds in UKB Biobank.

Multimodal Image Segmentation Tool

WIN Information Retrieval Engine

Download open access data sets from popular online repos. Part of WIN's open science initiative.