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stochastic PROFUMO (sPROFUMO), to be integrated within PROFUMO

Clique Reduction by Excludable Local Configuration https://www.f.waseda.jp/hfs/software.html

CUSP : A C++ Templated Sparse Matrix Library

precompiled VTK-7.0

Tensor Image Registration Library - a modular general-purpose image registration framework for Python with prebaked scripts for histology-to-MRI registration.

A newmat-like wrapper around the Armadillo linear algebra library (http://arma.sourceforge.net/)