Explore projects

use enantiomorphic technique to fill pathological sections of a 3d brain image. Requires a binary mask with ones in areas of damage.

Repository for spec2nii test data.

Grid submission wrapper

Code for "Harmonising large-scale imaging databases to provide integrated assessments of the role of white matter hyperintensities in cognitive aging." Discovery Award Project

Tools to move FEAT folders, etc fixing paths in the process

Jupyter notebook-based practicals for the 2018 WIN PyTreat

The FSL installer (for conda-based FSL releases)

FSLeyes, the FSL image viewer.

Python implementation of FSL's FIX tool for denoising

Additive Signal Change inference tool.

Pipeline for brain imaging processing of UK Biobank.

Pipeline developed by Fidel Alfaro Almagro, Steve Smith and Mark Jenkinson.

Contributions by FMRIB Analysis Group, University of Oxford.

CUSP : A C++ Templated Sparse Matrix Library

An cut-down version of the FSL FEAT GUI for educational purposes

Talks, practicals, and other materials for the 2020 WIN PyTreat