Explore projects

This is a project for hierarchical modelling of white matter tract useful for fixel based analysis.

Talks, practicals, and other materials for the 2020 WIN PyTreat

stochastic PROFUMO (sPROFUMO), to be integrated within PROFUMO

FastPtx: a python pTx pulse design tool for freely optimizing RF and gradient pulses with autodifferentiation

FSL Tools for MR Spectroscopy - Fitting/Plotting/Simulations/etc.

FSL documentation

The FMRIB UKBiobank Normalisation, Processing And Cleaning Kit

FSL documentation

predict a GCA score in a CT image

FSL based CT image processing programs

A collection of custom wx widgets and utilities used by FSLeyes.

Neonatal diffusion MRI (dMRI) data analysis pipeline

FSLeyes, the FSL image viewer.

Version 1.5 of the Pipeline for brain imaging processing of UK Biobank.

Pipeline developed by Fidel Alfaro Almagro, Steve Smith and Mark Jenkinson.

Contributions by FMRIB Analysis Group, University of Oxford.