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This repository contains processing code and result files associated with the following publication: Cortical morphology and white matter tractography of three phylogenetically distant primates: Evidence for a simian elaboration

Utility to download and install FSL modules - patch files, atlases, standard templates, example data, etc etc.

Pipeline for brain imaging processing of UK Biobank.

Pipeline developed by Fidel Alfaro Almagro, Steve Smith and Mark Jenkinson.

Contributions by FMRIB Analysis Group, University of Oxford.

FSL-MRS code for the 2021 diffusion weighted MRS workshop.

Code used for the analyses presented in the paper "White matter hyperintensities classified according to intensity and spatial location reveal specific associations with cognitive performance" by Melazzini et al.,

Mendelian randomisation meets neuroimaging

FSLeyes, the FSL image viewer.

WIN Information Retrieval Engine

Download open access data sets from popular online repos. Part of WIN's open science initiative.

Educational material for the WIN Analysis Group

Collection of pipelines for T2w, DWI and QSM imaging for Merima's studies.

Jupyter notebook-based practicals for the 2018 WIN PyTreat

Space for the Open OxCIN Neuroimaging Community to build and share resources.

Served at https://open.oxcin.ox.ac.uk/pages/open-science/community/Open-WIN-Community/

Tractograms and masks associated with Folloni et al., 2019 eLife

Multimodal Image Segmentation Tool

Code for the generation, processing, and analysis of imaging confounds in UKB Biobank.