Explore projects

Pipeline for brain imaging processing of UK Biobank.

Pipeline developed by Fidel Alfaro Almagro, Steve Smith and Mark Jenkinson.

Contributions by FMRIB Analysis Group, University of Oxford.

Tensor Image Registration Library - a modular general-purpose image registration framework for Python with prebaked scripts for histology-to-MRI registration.

The FSL wiki generated from markdown files

FSL tool o deface a structural T1w image.

Code to support the BigMac dataset: an open resource combining multi-contrast MRI and microscopy in a macaque brain.

A toolbox to localise common surgical targets using multimodal MRI

The FSL Python Library

FSL Tools for MR Spectroscopy - Fitting/Plotting/Simulations/etc.

My copy of FSL/base