Explore projects
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Code used for the analyses presented in the paper "White matter hyperintensities classified according to intensity and spatial location reveal specific associations with cognitive performance" by Melazzini et al.,
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WIN Information Retrieval Engine
Download open access data sets from popular online repos. Part of WIN's open science initiative.
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MRS basis spectra for WIN sequences generated using FSL-MRS's simulator.
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A repo of folders containing Vagrant files that define useful Virtualbox recipes
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Fidel Alfaro Almagro / UKB_UNCONFOUND_v2
Apache License 2.0Code for the generation, processing, and analysis of imaging confounds in UKB Biobank.
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Tom Nichols / UKB_UNCONFOUND_v2
Apache License 2.0Code for the generation, processing, and analysis of imaging confounds in UKB Biobank.
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FSL / ukbparse
Apache License 2.0The FMRIB UK BioBank data processing library. ukbparse is no longer being developed - it has been superseded by funpack - https://git.fmrib.ox.ac.uk/fsl/funpack/
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Scripts for QSM processing of the UK Biobank swMRI data
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Fidel Alfaro Almagro / UK_biobank_pipeline_v_1.5
Apache License 2.0Version 1.5 of the Pipeline for brain imaging processing of UK Biobank.
Pipeline developed by Fidel Alfaro Almagro, Steve Smith and Mark Jenkinson.
Contributions by FMRIB Analysis Group, University of Oxford.
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Hossein Rafipoor / UK_biobank_pipeline_v_1
Apache License 2.0Pipeline for brain imaging processing of UK Biobank.
Pipeline developed by Fidel Alfaro Almagro, Steve Smith and Mark Jenkinson.
Contributions by FMRIB Analysis Group, University of Oxford.
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Tom Nichols / UK_biobank_pipeline_v_1
Apache License 2.0Pipeline for brain imaging processing of UK Biobank.
Pipeline developed by Fidel Alfaro Almagro, Steve Smith and Mark Jenkinson.
Contributions by FMRIB Analysis Group, University of Oxford.
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open-science / analysis / UK_biobank_pipeline_v_1
Apache License 2.0Pipeline for brain imaging processing of UK Biobank.
Pipeline developed by Fidel Alfaro Almagro, Steve Smith and Mark Jenkinson.
Contributions by FMRIB Analysis Group, University of Oxford.
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Fidel Alfaro Almagro / UK_biobank_pipeline_v_1
Apache License 2.0Pipeline for brain imaging processing of UK Biobank.
Pipeline developed by Fidel Alfaro Almagro, Steve Smith and Mark Jenkinson.
Contributions by FMRIB Analysis Group, University of Oxford.
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Tom Whyntie / UK_biobank_pipeline_v_1
Apache License 2.0Pipeline for brain imaging processing of UK Biobank.
Pipeline developed by Fidel Alfaro Almagro, Steve Smith and Mark Jenkinson.
Contributions by FMRIB Analysis Group, University of Oxford.
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