Explore projects

This project aims to transfer the old tbss code from bash script to python and leverage fsl-pipe and fsl file-tree for pipeline creation and file management.

strokeseg is a python package + command line program to identify stroke in clinical brain images.

stochastic PROFUMO (sPROFUMO), to be integrated within PROFUMO

stochastic PROFUMO (sPROFUMO), to be integrated within PROFUMO

Scripts for processing spinal cord dMRI data.

Repository for spec2nii test data.

Remove stupidly high intensities from MRI images which might negatively affect registration.

python import and process DICOM images for QA

Talks, practicals, and other materials for the 2020 WIN PyTreat

Talks, practicals, and other materials for the 2020 WIN PyTreat

Talks, practicals, and other materials for the 2020 WIN PyTreat

Talks, practicals, and other materials for the 2020 WIN PyTreat

Talks and Jupyter notebook-based practicals for the 2018 WIN PyTreat

Jupyter notebook-based practicals for the 2018 WIN PyTreat

Jupyter notebook-based practicals for the 2018 WIN PyTreat