Pipeline for brain imaging processing of UK Biobank.
Pipeline developed by Fidel Alfaro Almagro, Steve Smith and Mark Jenkinson.
Contributions by FMRIB Analysis Group, University of Oxford.
Tensor Image Registration Library - a modular general-purpose image registration framework for Python with prebaked scripts for histology-to-MRI registration.
FileTrees provide a way to define the content of a structured directory. This can be very handy when defining input/output files for a pipeline.
An fsleyes plugin for NIfTI-MRS data
Code to support the BigMac dataset: an open resource combining multi-contrast MRI and microscopy in a macaque brain.
Grid submission wrapper
A toolbox to localise common surgical targets using multimodal MRI