Explore projects

FSL Tools for MR Spectroscopy - Fitting/Plotting/Simulations/etc.

FSL Tools for MR Spectroscopy - Fitting/Plotting/Simulations/etc.

these are a set of scripts that I use to evaluate PROFUMO results on BDI clusters, slowly tidying them up

Python implementation of FSL's FIX tool for denoising

Repository for the FSL-MRS dynamic fitting paper: Universal Dynamic Fitting of Magnetic Resonance Spectroscopy

A toolbox to localise common surgical targets using multimodal MRI

MRS basis spectra for WIN sequences generated using FSL-MRS's simulator.

The FMRIB UKBioBank Normalisation, Parsing And Cleaning Kit

The FMRIB UKBiobank Normalisation, Processing And Cleaning Kit

A growing and evolving collection of image processing scripts that are based on TIRL.

Code to support the BigMac dataset: an open resource combining multi-contrast MRI and microscopy in a macaque brain.

Talks, practicals, and other materials for the 2020 WIN PyTreat

stochastic PROFUMO (sPROFUMO), to be integrated within PROFUMO

predict a GCA score in a CT image