Explore projects

Pipeline for brain imaging processing of UK Biobank.

Pipeline developed by Fidel Alfaro Almagro, Steve Smith and Mark Jenkinson.

Contributions by FMRIB Analysis Group, University of Oxford.

Pipeline for brain imaging processing of UK Biobank.

Pipeline developed by Fidel Alfaro Almagro, Steve Smith and Mark Jenkinson.

Contributions by FMRIB Analysis Group, University of Oxford.

Pipeline for brain imaging processing of UK Biobank.

Pipeline developed by Fidel Alfaro Almagro, Steve Smith and Mark Jenkinson.

Contributions by FMRIB Analysis Group, University of Oxford.

Matlab-based simulation tool for the DANTE-SPACE sequence, using the extended phase graph (EPG) formalism

A growing and evolving collection of image processing scripts that are based on TIRL.

My copy of FSL/base

Compilation of practicals for thee Advanced Analysis part of the WIN@FMRIB Graduate Programme

Analysis pipeline used in the ‘Capturing MultiORgan Effects of COVID-19’ (C-MORE) study.

BRC-EM Transparent and Reproducible fMRI Analysis guide. Code and tutorials for analysis of a typical functional magnetic resonance imaging (fMRI) task data set collected as part of a study adopted by the University of Oxford Health Biomedical Research Centre (BRC) Experimental Medicine theme (BRC-EM).

Exploring, adapting, modifying the UK biobank imaging pipeline codes for the implementation on DPUK cohorts data

Preprocessing weighted scans for preclinical Multi-Parameter Mapping

Scripts for QSM processing of the UK Biobank swMRI data

MEG project to look for learning mechanisms relying on replay of object vector representations and