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BRC-EM Transparent and Reproducible fMRI Analysis guide. Code and tutorials for analysis of a typical functional magnetic resonance imaging (fMRI) task data set collected as part of a study adopted by the University of Oxford Health Biomedical Research Centre (BRC) Experimental Medicine theme (BRC-EM).

Preprocessing weighted scans for preclinical Multi-Parameter Mapping

Code for the generation, processing, and analysis of imaging confounds in UKB Biobank.

Pipeline for brain imaging processing of UK Biobank.

Pipeline developed by Fidel Alfaro Almagro, Steve Smith and Mark Jenkinson.

Contributions by FMRIB Analysis Group, University of Oxford.

Version 1.5 of the Pipeline for brain imaging processing of UK Biobank.

Pipeline developed by Fidel Alfaro Almagro, Steve Smith and Mark Jenkinson.

Contributions by FMRIB Analysis Group, University of Oxford.

Scripts for QSM processing of the UK Biobank swMRI data

MEG project to look for learning mechanisms relying on replay of object vector representations and

This repository contains processing code and result files associated with the following publication: Cortical morphology and white matter tractography of three phylogenetically distant primates: Evidence for a simian elaboration

This repository contains processing code and result files associated with the following publication: Cortical morphology and white matter tractography of three phylogenetically distant primates: Evidence for a simian elaboration

Matlab code to perform Hidden Markov modelling of entorhinal cortex optogenetic-fMRI.

Repository for code and materials from 'A macroscopic link between tract myelination and tract physiology during action reprogramming' by Lazari et al.

Repository for code and materials from 'Reassessing associations between white matter and behaviour with multimodal microstructural imaging' by Lazari et al.