Explore projects

Binocular Energy Model for binocular disparity detection in V1 complex cells

Code relating to reference: AFD Howard, J Mollink, M Kleinnijenhuis, M Pallebage-Gamarallage, M Bastiani, M Cottaar, KL Miller & S Jbabdi, Joint modelling of diffusion MRI and microscopy, Neuroimage, 2019.

FIX - FMRIB's ICA-based Xnoiseifier Gholamreza Salimi-Khorshidi and Stephen Smith, FMRIB Analysis Group MATLAB compilation/wrapper Duncan Mortimer Copyright (C) 2012-2019 University of Oxford

This flashing checkerboard script presents black screen vs flashing checkerboards in a block design. You will need a button box / gamepad device to trigger and record responses. Participant fixation is controlled via a simple fixation task.

files for the RSA tutorial

This project contains all the code for behavioural analysis of subject performance

Computational modelling course taught as part of the WIN graduate programme.

Pipeline for brain imaging processing of UK Biobank.

Pipeline developed by Fidel Alfaro Almagro, Steve Smith and Mark Jenkinson.

Contributions by FMRIB Analysis Group, University of Oxford.

This folder contains practical sessions from a course taught in the Experimental Psychology department at the University of Oxford on computational modelling of behavioural data, building on the paradigm of Behrens et al. (NN, 2007).

Pipeline for brain imaging processing of UK Biobank.

Pipeline developed by Fidel Alfaro Almagro, Steve Smith and Mark Jenkinson.

Contributions by FMRIB Analysis Group, University of Oxford.

Matlab/Cogent version of Information Seeking paradigm from Hunt et al., PLoS Biology 2016.

Code for a particle filter.