these are a set of scripts that I use to evaluate PROFUMO results on BDI clusters, slowly tidying them up
Python implementation of FSL's FIX tool for denoising
FSL Tools for MR Spectroscopy - Fitting/Plotting/Simulations/etc.
import and process DICOM images for QA
FSL releases of ihuszar/tirl - new changes are to be manually added to the main branch. All other branches are for historical purposes only.
predict a GCA score in a CT image
MRS basis spectra for WIN sequences generated using FSL-MRS's simulator.
The FMRIB UKBioBank Normalisation, Parsing And Cleaning Kit
Repository for the FSL-MRS dynamic fitting paper: Universal Dynamic Fitting of Magnetic Resonance Spectroscopy
A toolbox to localise common surgical targets using multimodal MRI
The FMRIB UKBiobank Normalisation, Processing And Cleaning Kit
A growing and evolving collection of image processing scripts that are based on TIRL.
Code to support the BigMac dataset: an open resource combining multi-contrast MRI and microscopy in a macaque brain.
MRS density matrix simulator