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Bug list compartments

Michiel Cottaar requested to merge bug-list-compartments into master

This is a bug fix unrelated created due to the refactoring of adding a compartments directory in !7 (merged) .

The list_compartments function in base.py could not list the actual compartments, because they were defined in different files. I've now moved this function to the __init__, where I now import the relevant compartments.

Edited by Michiel Cottaar

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