Explore projects

The FSL Python Library

FSL Tools for MR Spectroscopy - Fitting/Plotting/Simulations/etc.

Talks, practicals, and other materials for the 2020 WIN PyTreat

The FSL Evaluation and Example Data Suite (FEEDS), now in Python!

FSLeyes, the FSL image viewer.

Exploring machine learning methods, with special focus on the deep learning methods in order to attempt Neuroimage segmentation and analysis

Triplanar U-Net ensemble network (TrUE-Net) model for WMH segmentation

Code for inferring PRObabilistic FUnctional MOdes. See DOI: 10.1016/j.neuroimage.2015.01.013 and DOI: 10.1016/j.neuroimage.2020.117226.

FSL documentation

An fsleyes plugin for NIfTI-MRS data

Reconstruction code for MRSI including Uzay Emir's COMCEPT at 7T

Computational modelling course taught as part of the WIN graduate programme.

Analysis pipeline used in the ‘Capturing MultiORgan Effects of COVID-19’ (C-MORE) study.

CLI to download entire projects from openneuro.org