Explore projects

get a real dataset location from a dataset_loc.txt file in a zenodo repository. Useful for WIN DigitalBrainBank

X-species automated tractography tool - development is now at https://github.com/SPMIC-UoN/xtract

Code for "Harmonising large-scale imaging databases to provide integrated assessments of the role of white matter hyperintensities in cognitive aging." Discovery Award Project

WIN Information Retrieval Engine

Download open access data sets from popular online repos. Part of WIN's open science initiative.

Computational modelling course taught as part of the WIN graduate programme.

MRS basis spectra for WIN sequences generated using FSL-MRS's simulator.

This is a project for hierarchical modelling of white matter tract useful for fixel based analysis.

A repo of folders containing Vagrant files that define useful Virtualbox recipes

The FMRIB UK BioBank data processing library. ukbparse is no longer being developed - it has been superseded by funpack - https://git.fmrib.ox.ac.uk/fsl/funpack/

Code for the generation, processing, and analysis of imaging confounds in UKB Biobank.

Code for the generation, processing, and analysis of imaging confounds in UKB Biobank.

Exploring, adapting, modifying the UK biobank imaging pipeline codes for the implementation on DPUK cohorts data

Scripts for QSM processing of the UK Biobank swMRI data