GitLab

Educational material for the WIN Analysis Group

FSLeyes, the FSL image viewer.

Data for Xtract

Beta version of MMORF for internal FMRIB release.

Code for inferring PRObabilistic FUnctional MOdes. See DOI: 10.1016/j.neuroimage.2015.01.013 and DOI: 10.1016/j.neuroimage.2020.117226.

X-species automated tractography tool

Talks, practicals, and other materials for the 2020 WIN PyTreat

development of the process and decision tree for sharing data on the WIN XNAT server

The FSL Python Library

CLI to download entire projects from openneuro.org

Binocular Energy Model for binocular disparity detection in V1 complex cells

Analysis pipeline used in the ‘Capturing MultiORgan Effects of COVID-19’ (C-MORE) study.

Code for the generation, processing, and analysis of imaging confounds in UKB Biobank.

Compilation of practicals for thee Advanced Analysis part of the WIN@FMRIB Graduate Programme

repo of files sorted by each meeting

Exploring machine learning methods, with special focus on the deep learning methods in order to attempt Neuroimage segmentation and analysis

FIX - FMRIB's ICA-based Xnoiseifier Gholamreza Salimi-Khorshidi and Stephen Smith, FMRIB Analysis Group MATLAB compilation/wrapper Duncan Mortimer Copyright (C) 2012-2019 University of Oxford

A newmat-like wrapper around the Armadillo linear algebra library (http://arma.sourceforge.net/)

Tensor Image Registration Library - a modular general-purpose image registration framework for Python with prebaked scripts for histology-to-MRI registration.