Re-created bip repository

bip/data/dMRI/autoptx/protocols/unc_l/._seed.nii.gz

bip/data/dMRI/autoptx/protocols/unc_l/._target.nii.gz

bip/data/dMRI/autoptx/protocols/unc_l/exclude.nii.gz

bip/data/dMRI/autoptx/protocols/unc_l/seed.nii.gz

bip/data/dMRI/autoptx/protocols/unc_l/target.nii.gz

bip/data/dMRI/autoptx/protocols/unc_r/._exclude.nii.gz

bip/data/dMRI/autoptx/protocols/unc_r/._seed.nii.gz

bip/data/dMRI/autoptx/protocols/unc_r/._target.nii.gz

bip/data/dMRI/autoptx/protocols/unc_r/exclude.nii.gz

bip/data/dMRI/autoptx/protocols/unc_r/seed.nii.gz

bip/data/dMRI/autoptx/protocols/unc_r/target.nii.gz

bip/data/dMRI/autoptx/struct_list.json

bip/data/dMRI/b0_threshold.txt

bip/data/dMRI/dMRI_reg_optimal_parameters/exampleReg

bip/data/dMRI/dMRI_reg_optimal_parameters/exampleReg_2

bip/data/dMRI/dMRI_reg_optimal_parameters/exampleReg_3

bip/data/dMRI/dMRI_reg_optimal_parameters/oxford_s1.cnf

bip/data/dMRI/dMRI_reg_optimal_parameters/oxford_s2.cnf

bip/data/dMRI/dMRI_reg_optimal_parameters/oxford_s3.cnf

bip/data/dMRI/dMRI_reg_optimal_parameters/rotterdam_s1.cnf